Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01824 ATGTCTCTCAAGTTTGTAATAGTGCTATTTTTGCTGGTGACAGTGGTAGCCAGTGAATATAGCAGTTTCACCTATAATGGGTTCCAATCAGCTCATTTGTATCTTGATGGTAATGCTGACTTCACCTCTAATGGCCTACTCAGACTCACCAATGACACCAAGCAACAAAAGGGTCATGCTTTCTACCCAAATCCTATAGTTTTCAAGAACACCTTCAATGGAAGTGTGTCTTCTTTTTCCACAACTTTTGTCTTTGCCATAAGATCTGAGTATCCAACTCTGAGTGGTCATGGGATTGTTTTTGTGGTTTCCCCAACAAAAGGGTTTCCAGATTCTCTTCCAAGCCAGTACCTTGGCCTCTTCAATGAGGTAAACAACGGCAACAACAGCAACCGTGTTTTTGGGGTGGAACTTGATACCATTCAGAACAGCGAGTTTGCTGACATCAATGACAATCATGTTGGAATTGATATCAATGGCTTAAAGTCAGCTAAATCAGCTCCTGCAGGGTATTACATTGGTGGTGTGTTCAAGAATTTGAGCCTTTTCAGTGGCTATCCAATGCAGGTATGGGTGGAATATGATGGGGAAAAGAAACAGATTGATGTTACTTTAGCTCCAATCAATGTTGATAAACCAGAACACCCTTTGTTATCATTGACCAAAGATCTTTCTCCAATTCTGAACAATAGCATGTATGTTGGTTTGTCATCCTCTACAGGGTCAGTTCTAACTTCCCATTATGTTCTTGGTTGGAGCTTTAAGGTGAATGGCAAAGCTCAACAACTTGTAATCTCTGAACTCCCCAAGCTTCCTAGATTAGGTGATAAACAAGAGTCTATGGTTTTATTTGTTGGGTTGCCTCTGATATCTCTCAGTTTGATTCTCATGGTAGTTCTAGCAGTGGTTCATGTCACCAAAAGGAAGAAGTTTTCTGAGCTGCTTGAAGATTGGGAGCAGGACTATGGTCCTCATAGATTCAAGTACAAAGATCTTTACTTTGCCACAAAGGGGTTCAGGGAGCAGGAGTTATTGGGAAGTGGTGGGTTTGGTCGAGTCTACAAAGGTGTGATGCCAATTTCCAAAACTGAGGTTGCAGTGAAGAGGGTGTCCCATGAATCCAGACAAGGGATAAGGGAATTTGTGGCAGAAATTGTTAGCATTGGTCGTCTTCGCCACAGGAATTTGGTTCCTCTTCTTGGCTATTGCAGGCGCAAAGGAGAGTTGCTTTTGGTCTATGATTACATGCCAAATGGAAGCCTAGACAAGTATCTCTATGACCAACCAAGAGTGACCCTGAATTGGAGCCAGAGATTTACAATCATCAAAGGGGTTGCTTCAGGTTTGTTTTATTTACATGAAGAATGGGAGCAAGTTGTGGTACATAGAGACATTAAGGCTAGCAATGTACTACTAGATACAGAATTGAATGGTAGATTAGGGGATTTTGGTCTTGCAAGGTTATATGACCACGGAACTGATCCTCAAACTACCCATGTGGTTGGAACTGTTGGGTATCTGGCCCCTGAGCATACTAGAACAGGTAAGGCTACTACAAGCTCTGATGTGTTTGCTTTTGGTGCATTTGTGCTAGAGGTTGCTTGTGGAAGGAGGCCTATAGATGAGAGTGCAATTCTTGTTGATTGGGTGTATGATTGCTGGAAAAGAGGTGAGATTCTTGAGGCAAAGGATCCAAATTTGGGCACAGATTATAGGCCAGAGGAGGTGGAACTGGTTTTGAAACTTGGTTTGTTGTGCTCACATTCAGAGCCATTGGCTAGACCAAGCATGCGCCAAGTTGTGCAGTACTTGGACAGGGATGTGCCTCTGCCAGATATGTCATTGCTTAGCTTATCTTCCAGTGGCTTAACTTTTGGGCACCATGAAAACTTTCAGGACTATCCAATGTCCTATCCATCTTCTATAGATAGGCCTTTCTCCCATACTTCTTCAATTGCAGAATCACTTCTCTCTGGTGGTCGTTGA 1986 0.4265 MSLKFVIVLFLLVTVVASEYSSFTYNGFQSAHLYLDGNADFTSNGLLRLTNDTKQQKGHAFYPNPIVFKNTFNGSVSSFSTTFVFAIRSEYPTLSGHGIVFVVSPTKGFPDSLPSQYLGLFNEVNNGNNSNRVFGVELDTIQNSEFADINDNHVGIDINGLKSAKSAPAGYYIGGVFKNLSLFSGYPMQVWVEYDGEKKQIDVTLAPINVDKPEHPLLSLTKDLSPILNNSMYVGLSSSTGSVLTSHYVLGWSFKVNGKAQQLVISELPKLPRLGDKQESMVLFVGLPLISLSLILMVVLAVVHVTKRKKFSELLEDWEQDYGPHRFKYKDLYFATKGFREQELLGSGGFGRVYKGVMPISKTEVAVKRVSHESRQGIREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDKYLYDQPRVTLNWSQRFTIIKGVASGLFYLHEEWEQVVVHRDIKASNVLLDTELNGRLGDFGLARLYDHGTDPQTTHVVGTVGYLAPEHTRTGKATTSSDVFAFGAFVLEVACGRRPIDESAILVDWVYDCWKRGEILEAKDPNLGTDYRPEEVELVLKLGLLCSHSEPLARPSMRQVVQYLDRDVPLPDMSLLSLSSSGLTFGHHENFQDYPMSYPSSIDRPFSHTSSIAESLLSGGR. 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01824 661 ProSiteProfiles Protein kinase domain profile. 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01824 661 PANTHER - 17 609 - -
Seca2g01824 661 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Seca2g01824 661 SMART serkin_6 339 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01824 661 SUPERFAMILY Protein kinase-like (PK-like) 320 618 IPR011009 -
Seca2g01824 661 FunFam L-type lectin-domain containing receptor kinase S.4 416 617 - -
Seca2g01824 661 Gene3D Transferase(Phosphotransferase) domain 1 416 616 - -
Seca2g01824 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 275 IPR013320 -
Seca2g01824 661 Gene3D - 19 268 - -
Seca2g01824 661 FunFam Lectin-domain containing receptor kinase A4.3 324 415 - -
Seca2g01824 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Seca2g01824 661 FunFam L-type lectin-domain containing receptor kinase V.9 20 261 - -
Seca2g01824 661 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Seca2g01824 661 CDD STKc_IRAK 345 606 - -
Seca2g01824 661 Pfam Legume lectin domain 21 268 IPR001220 GO:0030246
Seca2g01824 661 CDD lectin_legume_LecRK_Arcelin_ConA 22 258 IPR001220 GO:0030246
Seca2g01824 661 Pfam Protein kinase domain 340 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01824 Seca-Chr2 35657557 35659563 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01824 17 661 Receptor kinase-like Gene Family AT2G37710 65.191 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca2g01824 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01824 - - gmx:100802293 1067.76