Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01798 ATGGCTGGGAAAGGTGAGGGACCGACGATCAGAATCGTTCTGAGAACGACTTACTCTTCCTTTGGTGTTTGGCATCACGATCGTGTTGAAATCATCGTCAACGATCAAGATAACAGAACCACTCCATCCTATGTTGCTTTCACTGACACGGAGTGCTTGATTGTCGATGCAGCCAAGAACCAGGCCGATATGTACCTAACCAACCCTATTTTTTATGCTAAGCATTTGATCGGAATGTGTTTTAGCGATTCTTCGGTACAGAGTGACATGAAATTGTGGTTGTTTAAGGTGATTGCTGGTCCTGGTGATAAGACTATGATTGTGATTAATTACAAGGGGGAAGAGGAGCAGTTTTATGCGGAAGAGCTATTTTCCATGGTTCTTATGAAGATAAAGGAGATTGCAGAGGCGTATCTAGGTTCCACGGTGAAGAATGTTGTAGTCACTGTTCCCGCTTACTTCAATGACTCGCAGCTATTTGATGAAATGTTAGAAATGGATGTGCAGAGGGTGTTTGATAAAATGTCTGATAGGGATGTGCAGAAACTATTTGCTGAAATAAACATTGGGTTTGTTTCATATGATGTAGGACTTGATGTTGACCACTGCAAGGTCCTTGTCAACATCGAGCAGCAGAACCCTGATATTGCTCAGGGTGTGCACAACCATTTCACAAAAGGACCTGAGGAAATTGGTGCCGTTGACCAGGGTCACATGTTTAGCTACGCCACTAATAAGACCCCTGAACTAATGCCTTTGAGCCATGTTCTTGCGACTAAGTTTGGTGCTTGTCTCACTGAAGTACGCAAGAACGGTACCTGCCCCTGGTTGAGACCTGATGGCAAGACCCAAGTCACTGTTGAGTATTACAATGACAAGGGTTCCATAATTCCTATTTGA 900 0.4378 MAGKGEGPTIRIVLRTTYSSFGVWHHDRVEIIVNDQDNRTTPSYVAFTDTECLIVDAAKNQADMYLTNPIFYAKHLIGMCFSDSSVQSDMKLWLFKVIAGPGDKTMIVINYKGEEEQFYAEELFSMVLMKIKEIAEAYLGSTVKNVVVTVPAYFNDSQLFDEMLEMDVQRVFDKMSDRDVQKLFAEINIGFVSYDVGLDVDHCKVLVNIEQQNPDIAQGVHNHFTKGPEEIGAVDQGHMFSYATNKTPELMPLSHVLATKFGACLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGSIIPI. 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01798 299 FunFam heat shock 70 kDa protein-like 71 126 - -
Seca2g01798 299 PANTHER HEAT SHOCK PROTEIN 70KDA 10 158 IPR013126 GO:0005524|GO:0140662
Seca2g01798 299 SUPERFAMILY S-adenosylmethionine synthetase 187 223 IPR022636 GO:0004478|GO:0006556
Seca2g01798 299 Gene3D - 188 229 - -
Seca2g01798 299 Gene3D - 253 294 - -
Seca2g01798 299 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca2g01798 299 PRINTS 70kDa heat shock protein signature 146 166 - -
Seca2g01798 299 PRINTS 70kDa heat shock protein signature 36 48 - -
Seca2g01798 299 Pfam Hsp70 protein 12 158 IPR013126 GO:0005524|GO:0140662
Seca2g01798 299 SUPERFAMILY Actin-like ATPase domain 16 158 IPR043129 -
Seca2g01798 299 Gene3D - 6 163 - -
Seca2g01798 299 Gene3D - 230 252 - -
Seca2g01798 299 Pfam S-adenosylmethionine synthetase, central domain 230 291 IPR022629 GO:0004478|GO:0006556
Seca2g01798 299 SUPERFAMILY S-adenosylmethionine synthetase 228 298 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01798 Seca-Chr2 34713600 34714499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01798 1 158 Calmodulin-binding Proteins AT5G02500 72.785 1.56e-74 235