Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01785 ATGGAAGCCACTTCTATTACACAGTTGTTGAAGGGCTTTTGTGATAATACACAATGGGAATATGCTGTCTTTTGGAAGCTTAACCACCATTTTCCAATGACTTTGGCCTGGGAAAGTGGTTACAAGAAGAGAAATGAGGCTGTGGAAAGTATGTGGGATTTCAAATCACCAGATGAGGTATATTCTTCAAGCAGTGATAGCAGTGATGATTCAGGAGAATATTCAGCTCGACTACTCATGGTTGAAATGTCTAATCGTAAATACAGTTTGGGAGAAGGGGTTGTTGGCAGAATAGCCCTTGCCAGTGATCATTGTTGGGTTTTCTGTGAGGATATTCTCACCAGTAAATTTGACACTGATTTGATTCCTGAGTGTCCTGATGAGTGGCTACTTCAATTTGCATCTGGCATCAAGACTATTGTGCTGGTACCAGTTCTTCCACAAGGGGTTTTGCAGTTTGGTTCATTTGAAGTGGTTGCTGAAGACCTGGAATTTGTTACCAATGTCAAGGAGAAATTCCATTACATTCATTGTCTGGAAGCTAATACTACACCTGTGAACTTGGGAATTGATTATCAAGATTGGTCATTCTCAGCCCTATCACATAATTTGATGGATAGCTTGGACGAATCCTCATCTATTACAAATAATCTATTGAAAGGTGAAGTCTCAGATAGTACTGCACTCAATGTAAATGAATCAAGGTTGAACCAAAAAATGCTATCATTTCAGGATGACTATTGCTTGTCTAGAGAAAATCAGCTAAAATATCTCAACAGAGCAAATGACAATGACATAAGTTGCTCATCAATTGAGATGTCAATTGATCCAAGACATAATGGTCAGGTGGGGACAAAATTAAATTATATGGAGGAAGAGATATGGGCCTGGTCTCACTTGGTCAACAGTGTGGGGGTGGATGGAGACATTTCAAGTGGATTAGGCCCTTACTCTGGTAAAAATATGACACAGCAACAATTTGGAGCCGTTGAAGTTGGTCATGAACATGATGATGTTAAAAATGTTAATGACTTCAGTTTTCCCTCAGAGTCTGAATTGCACAAAGCACTTGGATCAGTTGCACATAGACAGACAGGCAAATCTATGTCGAAATATATCTCTGTTAAGGATACATACAGTAGCTCAACTTTAATATCCAATACAAAAGAGCATGATCAAGTTAAATGTTTGGAGTTTTCTGAAGAAGTTGATCCAGAATTTCTTTTGGATGCTATTATTGGCAATTTATGCAGTACCTCGGATGATACTTCAAGTATATCCAACAGTGTTAGGTCTCTTACAACCATGCCAATAAAGTTTACTGGTTCCATTCAACCAAAAGTTGATTCTGAAGAAAGCACTTTGATTGTGAAAAATTCAGATGTGAGAAGTGATCTTATGCCTGCTATGGTCAAGGGCAAAGATGAATTTACCAACCATTTCACATCAACATCCTTTGATGGAAAATCAAGCTTATTGATTGATGAAGCACCGCAGGAAAAGGTTAATAGTCATATGCAGCATATTAGTGGACCAAAGCTCTCTAGCACAAACAAGAAAAGACAAAGAGTTGGTAATAAGTCAAGGCCAAGAGATAGACAGATGATCATGGACAGGATGAAGGAGTTGAGGGAACTTATCCCAGATGGTAGTAGGTGTAGCATTGACAACCTTTTGGAACGGACCATAAAGCACATGATGTACTTAAGAAAGATAACAAGCCAGGCTGAGAAACTGAAACGATTTGCAGATCGAGAGGTTCCTAAGTGGAAAAAGCAGAAAATCAATGGCATCCATCCAGGAAGGAGCTGTGCATTTGACTTTGAGAGTGAACTAGCTTTGCCCATAGTCATAGAAGATCTGGAAAGCTCAGGGCACATGCTCATAGAGATGATATGCAATGAGCATGGACTTTTCTTGGAGATTGCTCAGGTGATCAGAAAGCTGGACATTACCATCTTGAAAGGGGTTTTAGAAAACCGTTCAAGCACCAGCTGGGCTTGCTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGGATGGATGTTTTATGTCCTTTACTACATTTACTGCAGCTTAGAAGAAACCATGTCTCATAA 2097 0.3944 MEATSITQLLKGFCDNTQWEYAVFWKLNHHFPMTLAWESGYKKRNEAVESMWDFKSPDEVYSSSSDSSDDSGEYSARLLMVEMSNRKYSLGEGVVGRIALASDHCWVFCEDILTSKFDTDLIPECPDEWLLQFASGIKTIVLVPVLPQGVLQFGSFEVVAEDLEFVTNVKEKFHYIHCLEANTTPVNLGIDYQDWSFSALSHNLMDSLDESSSITNNLLKGEVSDSTALNVNESRLNQKMLSFQDDYCLSRENQLKYLNRANDNDISCSSIEMSIDPRHNGQVGTKLNYMEEEIWAWSHLVNSVGVDGDISSGLGPYSGKNMTQQQFGAVEVGHEHDDVKNVNDFSFPSESELHKALGSVAHRQTGKSMSKYISVKDTYSSSTLISNTKEHDQVKCLEFSEEVDPEFLLDAIIGNLCSTSDDTSSISNSVRSLTTMPIKFTGSIQPKVDSEESTLIVKNSDVRSDLMPAMVKGKDEFTNHFTSTSFDGKSSLLIDEAPQEKVNSHMQHISGPKLSSTNKKRQRVGNKSRPRDRQMIMDRMKELRELIPDGSRCSIDNLLERTIKHMMYLRKITSQAEKLKRFADREVPKWKKQKINGIHPGRSCAFDFESELALPIVIEDLESSGHMLIEMICNEHGLFLEIAQVIRKLDITILKGVLENRSSTSWACFIVEVPRGFHRMDVLCPLLHLLQLRRNHVS. 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01785 698 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 326 696 IPR043561 GO:0003700|GO:0006355
Seca2g01785 698 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 173 IPR025610 -
Seca2g01785 698 MobiDBLite consensus disorder prediction 501 532 - -
Seca2g01785 698 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 520 569 IPR011598 GO:0046983
Seca2g01785 698 MobiDBLite consensus disorder prediction 503 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01785 Seca-Chr2 34521264 34527002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01785 351 695 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 35.027 1.64e-47 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01785 - - gmx:100820605 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01785 2 34521264 34527002 Seca2g01785 2 34521264 34527002 ECH