Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01775 ATGGACCATCATAAGATTAAAACGTTAATGTTCACAACAACTGCAGCATTGTTGCTATCATGCGCCGTGACGGTGCGGCAGTGCGGGAACTGCGGTCCGAACCCGGTTCCGTATCCATTAAGCACGGGACCTGACTGTGGTGACCCGTGGTACAAGATCCGGTGCACCGCAGGCACACTGTGGTTCGATGCACTTGCCGGATCATCCTATATGATTAGGTCCATTGACCCGGTAACCCGTCGGATCATAATCCGACCCGCTACCTTTCCAGTAAGCGCGTGCGTGTCCACGGATTTCCGCAGCGAAGGCATGCACCTGAACGAAACTCTTCCTTTTAGCGTGGGCGCGGGAAATACCATCTTTCTGTTCAACTGCACCGCCAACGCGCCTCACGCGCCGCCGTTGGACTGCTCGGCAAACAGCTTGTGCCACAGCTACATCAGGGACCACAAGGATGCCCGCGCGTGCGAGCGAGTGGGACAGTGCTGCGCGTACAAAACTGGAGGGGCGCGCAAAGAGTATGTGGTTCGGGTTCACCGCGCAGGGTGCGCGGCGTATCAGAGTTTTGTGGATTTGGATGGTGCGGTAGCGACGCCGGGAAAGCGGTGGCCGGAGCCTGGAGCGGGGATAGAGTGGGTGGCACCACAGGAACCGGTTTGTAAGGTGCCAATGGATTGCAAGGAATTATTGAACTCTAACTGTAGAGTGGGCCCGGGTGGAGGTGGGCTGCAGAGGTGCTTCTGCAATGCTGGTTTTAAGTGGGATCCTAGCAATGGATTGTGTCAACCTCAAACTCAAAATAAGCCCATAGACACAAAGTGCGTAGGACATGGGAAAGACAGCCACTGCAAAGTTCGAAAGAAAAAGAAAAAAACTTTGTTGTTTTCAGCTGTGGTTGTTTCCTTAGGAGGAATAGTCTCTATTGTAACAATAATTGGAGTCATTCTCTACAAGAAGCATAATCAAGTGGAGAGAAAAGAAAAGAAAACCATAATCAAAAAGGGAAAAGATATCTCAAGTGCTAAAGCTAGTGCTTTATCATCCAGGATGTTCACAGGCAGAGAGATAAAGAAAGCAACCAACAATTTCTCCCAAGAAAGGCTAATTGGCTCTGGTGGTTTTGGTGAAGTGTTCAAGGGAACTTTTGATGATGGAACAATCACTGCCATCAAGCGTGCCAAGCTTGGAAACACCAAAGGCATTGATCAAATACAGAATGAAGTTCGAATTCTCTGCCAAGTAAATCATAGGAGCCTAGTGAGACTACTTGGTTGTTGCTTGGAACTTGAGCACCCTTTACTAATATATGAATATGTTTCTAATGGGTCACTTTTTGATTACCTCCATCGCCACCCTTTTGGCACAAGGGCACCCCTTAATTGGCATCACAGACTCAAAATTGCACATCAAACAGCTGAAGGGCTTTCCTATTTGCATTCTGCTGCTGTGCCTCCCATTTACCACCGTGATGTGAAATCAAGCAATATATTACTTGATGACAAGCTTGATGCTAAAGTTTCTGACTTTGGATTATCTAGGCTTGTGGAAATAGCTGAACAAAACAAGAGCCATATTTTCACTAGTGCACAGGGGACACTTGGTTATCTTGACCCTGAATACTACAGGAACTTTCAATTGACAGATAAGAGTGATGTTTATAGCTTTGGGGTGGTGTTAATGGAGCTTCTCACTGCTCAGAAAGCTATTGATTTCAATAGGGAAGAAGAGGATGTGAACTTGGCAGTGTATGCAAGGAAGAAAATGATTGAAGACAGGTTGATGGATGTTGTTGATCCATTGCTTAAAGAGGGAGCTAGTGATTTAGAATTGGAAACTATGAAATCATTGGGTTATCTTGCAGCTGCATGTTTGGATGAGCAGAGGCAAAAACGGCCTTCAATGAAAGAGGTTTCAGATGAGATTGAATACCTGATTAAAATTGTTAAAGGTCAGGTTTCTAAACCATAA 1968 0.4639 MDHHKIKTLMFTTTAALLLSCAVTVRQCGNCGPNPVPYPLSTGPDCGDPWYKIRCTAGTLWFDALAGSSYMIRSIDPVTRRIIIRPATFPVSACVSTDFRSEGMHLNETLPFSVGAGNTIFLFNCTANAPHAPPLDCSANSLCHSYIRDHKDARACERVGQCCAYKTGGARKEYVVRVHRAGCAAYQSFVDLDGAVATPGKRWPEPGAGIEWVAPQEPVCKVPMDCKELLNSNCRVGPGGGGLQRCFCNAGFKWDPSNGLCQPQTQNKPIDTKCVGHGKDSHCKVRKKKKKTLLFSAVVVSLGGIVSIVTIIGVILYKKHNQVERKEKKTIIKKGKDISSAKASALSSRMFTGREIKKATNNFSQERLIGSGGFGEVFKGTFDDGTITAIKRAKLGNTKGIDQIQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYEYVSNGSLFDYLHRHPFGTRAPLNWHHRLKIAHQTAEGLSYLHSAAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVEIAEQNKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEEDVNLAVYARKKMIEDRLMDVVDPLLKEGASDLELETMKSLGYLAAACLDEQRQKRPSMKEVSDEIEYLIKIVKGQVSKP. 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01775 655 Gene3D Phosphorylase Kinase; domain 1 334 438 - -
Seca2g01775 655 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Seca2g01775 655 SUPERFAMILY Protein kinase-like (PK-like) 339 639 IPR011009 -
Seca2g01775 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Seca2g01775 655 ProSiteProfiles Protein kinase domain profile. 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01775 655 Gene3D Transferase(Phosphotransferase) domain 1 439 652 - -
Seca2g01775 655 Pfam Protein kinase domain 364 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01775 655 CDD STKc_IRAK 369 642 - -
Seca2g01775 655 FunFam Wall-associated receptor kinase-like 20 325 438 - -
Seca2g01775 655 SMART serkin_6 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01775 655 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Seca2g01775 655 FunFam Wall-associated receptor kinase-like 20 439 654 - -
Seca2g01775 655 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 27 644 IPR045274 GO:0007166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01775 Seca-Chr2 34242039 34245645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01775 27 654 Receptor kinase-like Gene Family AT5G02070 56.309 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca2g01775 Pkinase 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01775 - - aprc:113862410 1040.02