Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01761 ATGGGAGAAATTATTGAGAAGACCTATTTTTGCCATAGGGAAGGAAAGCGTCCAATTTACATGAAAGTAAAAAACGGGAAGAAAAACCGTGAAGCAAAGCCTGAAACAAGGTGTTTATGTCCTGCAAAAATGAAGGTTCGGTTACATGAACCTTCTAGCTGTTGGAACGTGACCAAGTTTTGTGATGCCCATAACCATGACATGCTACCCCACAAATACACAGGGATGCTACCTGCTCATAGGAAACTGAGTGAAGCTGACATCATGGAGATGAATAACATGCGAAATGTCGATATTAGTACACCACAGATTTATTGGTCATTTGCTAGCCAATCGGGGGGTTACAACAATATTGGTTTTCGGAAAATAGATCTTTACAATGAGATAGGTAGGCAAAGAATGTTGTAG 408 0.402 MGEIIEKTYFCHREGKRPIYMKVKNGKKNREAKPETRCLCPAKMKVRLHEPSSCWNVTKFCDAHNHDMLPHKYTGMLPAHRKLSEADIMEMNNMRNVDISTPQIYWSFASQSGGYNNIGFRKIDLYNEIGRQRML. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01761 135 Pfam FAR1 DNA-binding domain 2 69 IPR004330 -
Seca2g01761 135 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01761 Seca-Chr2 33858243 33858650 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g01761 FAR1 6.9e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01761 - - mtr:112420123 141.354