Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01727 ATGTCTGCAAGTGAGGAAGAGGTGAAGCTTTTCGGATCTGTGGGAAGCCCATTTGTCATAAGGGTTCAGATTGCTCTCAAATTGAAGGGAATTCAATACAAATACCAAGAAGAAAAATTGGGCTACTTGAGTGATGTGCTTCTCAAATACAACCCTATTTACAAGATGGTTCCTGTGTTTCTTCACAATGGGAACCCCATATCAGAATCCCTTGTGATTCTTGAGTACATCGATGACACCTGGAAAAACAACCCCATCTTGCCATCTGAACCTTACCAAAAAGCCATGGCTCGTTTCTGGGCCAAGTTCATAGATGATAAGTGTGTGGCTGCTGCATGGAAATCTGTTTTTCTTGTTGATGAGGAACAACGTGAGAAGGCTCGTGAGGAATTATTTGGGGCTCTGCAGTTTCTTGAGAATGAGCTGAAGGATAAGTTCTTTGGAGGAGAGGAGTTTGGCTTTATGGACATTGCTGCTCTCTTCATCCCTTTATTTCAAGAAGTAGCTGAGCTGCAGTTATTCACAAGTGAGAAATTTCCCAAGCTATATAAATGGAGCCAAGAATTTTACAACCATCCAATTGTCAAAGAAATTATGCCTTCTAAAGACCAACTCTCTGGCTATTTCAAAGCTCGTGCAGCATCCATTGCTGCTTCAAAAAAATAG 666 0.4144 MSASEEEVKLFGSVGSPFVIRVQIALKLKGIQYKYQEEKLGYLSDVLLKYNPIYKMVPVFLHNGNPISESLVILEYIDDTWKNNPILPSEPYQKAMARFWAKFIDDKCVAAAWKSVFLVDEEQREKAREELFGALQFLENELKDKFFGGEEFGFMDIAALFIPLFQEVAELQLFTSEKFPKLYKWSQEFYNHPIVKEIMPSKDQLSGYFKARAASIAASKK. 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01727 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 209 IPR010987 -
Seca2g01727 221 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Seca2g01727 221 SFLD Main.3: Omega- and Tau-like 5 220 IPR045073 -
Seca2g01727 221 CDD GST_C_Tau 91 212 IPR045074 GO:0004364|GO:0006749
Seca2g01727 221 Gene3D - 90 220 - -
Seca2g01727 221 FunFam Glutathione S-transferase GSTU6 3 87 - -
Seca2g01727 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 204 IPR045073 -
Seca2g01727 221 CDD GST_N_Tau 8 81 - -
Seca2g01727 221 SFLD Glutathione Transferase (cytosolic) 5 220 IPR040079 -
Seca2g01727 221 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Seca2g01727 221 SUPERFAMILY GST C-terminal domain-like 79 213 IPR036282 -
Seca2g01727 221 Gene3D Glutaredoxin 1 89 - -
Seca2g01727 221 FunFam Tau class glutathione S-transferase 87 219 - -
Seca2g01727 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Seca2g01727 221 Pfam Glutathione S-transferase, C-terminal domain 119 193 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01727 Seca-Chr2 32571733 32573482 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01727 5 219 Glutathione S-transferase Gene Family AT3G09270 50.901 1.47e-69 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01727 K00799 - gmx:548029 327.791