Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01712 ATGGAGAAGGAAAGTGGCATCGTGTTCCACTATTGGCTGGGTCTAAACAGGTGCAGAAAGAGTTGTAGGCTAAGGTGGCTGAACTATCTCCGTCCTAACATCAAGAGAGGAAATTTTGATGAGGAAGAAGTGGAAATGATTGTCAAACTTCACAAATTACTAGGCAACAGGTCAACTTTGACTTTGAAATTTTCCTTTTGGTATTTTCCAGTGTGTTACTCACACTAG 228 0.4079 MEKESGIVFHYWLGLNRCRKSCRLRWLNYLRPNIKRGNFDEEEVEMIVKLHKLLGNRSTLTLKFSFWYFPVCYSH. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01712 75 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 34 IPR017930 -
Seca2g01712 75 Pfam Myb-like DNA-binding domain 16 45 - -
Seca2g01712 75 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 14 59 - -
Seca2g01712 75 SUPERFAMILY Homeodomain-like 13 58 IPR009057 -
Seca2g01712 75 Gene3D - 6 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01712 Seca-Chr2 32155678 32156656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01712 14 57 MYB Transcription Factor Family AT5G16770 75.000 6.00e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01712 - K09422 gmx:100798101 93.9745