Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01650 ATGGACTGGACTAGGGGCCACACTCTTGACCGGGGCTCAACCGCCGCCGTCTACGCCACCGAGGATCACCGGTCCGGTCAAGTGTTCGCCGTGAAATCTGCAGAGCTTCATCACTCTGAATTCCTCAAGAGGAAGCAGGGGATTCTCTCCACATTGAAGTGTCCTCAAATCGTGGCTTACCAAGGTTGTGACGTCACGTTTGAGAATAGTGCTTACTGGTTCAACTTGTTCATGGAGTACGCACCTCACGGGACGCTCGTAGATGCAGTTCGCGAGCAGAATGGTGGAATGGAAGAAACCATGGTTGGTTCCTACGCGCGCCAAATTTTGCTCAGTCTCAACTACCACCAGCAGGAGAAGTGA 363 0.5317 MDWTRGHTLDRGSTAAVYATEDHRSGQVFAVKSAELHHSEFLKRKQGILSTLKCPQIVAYQGCDVTFENSAYWFNLFMEYAPHGTLVDAVREQNGGMEETMVGSYARQILLSLNYHQQEK. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01650 120 ProSiteProfiles Protein kinase domain profile. 3 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01650 120 SUPERFAMILY Protein kinase-like (PK-like) 2 115 IPR011009 -
Seca2g01650 120 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Seca2g01650 120 Pfam Protein kinase domain 6 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01650 120 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01650 Seca-Chr2 30211624 30211986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01650 1 120 MAP Kinase Kinase Kinase AT1G05100 49.600 2.22e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca2g01650 Pkinase 9.5e-11 CL0016