Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01635 ATGGATTTAAATAGTGATGATTCGGCTGTTAATCTGGAAGATGATAGAGACCTAAGTTATAGTGATTCTTCTAGCTCTAGCGATGATAAAAATCATAATGAAAATGATAGAGTAACAGATACTGAGGATGAAGTTAATGAAGAAGAGGTAGACACTGATGAGGTAAATGAATTTATGGATGCAGAAGTTGGAGGGGAGGTGTCAAGGAGGATAATTGATTTGACAAATGATGATATATGGGCATTGGAATTCTGTACTGAAAATGATGCATTCAATTTTTACTTTTCTTATGCAAGATGTCATGGTTTTGATGTGAGGATGGATGATGTAATTAAAGACAGTAAAGGTATGGTCATAATGCGACAATTCTTATGTAGTAGGGCTGGTTTGAGGGACAAAAAGTATTTGATTAGATTAGATCGGAAAAAGGAACATAGGCCTCTTACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGCTTTGATTATAAGACTGGGAAATTTAAGGTTGTTTCCTTTTTAGACTCTCATAACCATGATTTGACCCCTGCTAAATTTGTTCCTTTAATGCCTGCATATCGTGGTTTGAGTGATGGGGACAAAGCCCAACTTGATGCATTGCATTCTCATGGTGTTAGACCTTGTTAG 648 0.3642 MDLNSDDSAVNLEDDRDLSYSDSSSSSDDKNHNENDRVTDTEDEVNEEEVDTDEVNEFMDAEVGGEVSRRIIDLTNDDIWALEFCTENDAFNFYFSYARCHGFDVRMDDVIKDSKGMVIMRQFLCSRAGLRDKKYLIRLDRKKEHRPLTRTNCQAKLRVRFDYKTGKFKVVSFLDSHNHDLTPAKFVPLMPAYRGLSDGDKAQLDALHSHGVRPC. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01635 215 MobiDBLite consensus disorder prediction 40 55 - -
Seca2g01635 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 205 - -
Seca2g01635 215 MobiDBLite consensus disorder prediction 9 39 - -
Seca2g01635 215 MobiDBLite consensus disorder prediction 1 55 - -
Seca2g01635 215 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01635 Seca-Chr2 29675636 29676283 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g01635 FAR1 4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01635 - - ccaj:109794460 187.578