Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01613 ATGGGTCGCTCCATTTTATACCTTCACCTTCTTGTTTCATCTTTTCTCACTTTCACTTTGTTGCTGAATGCTGCTCATGCCAGCAAAAAGTGCTACATTGTATACTTGGGAGCACATTCTCATGGTCCAACCCCTTCCTCTCTTGACCTTGAAATTGCCACATCTTCTCATTATGATTTATTGGGCTCAATCTTAGGAAGCCATGAGAGAGCAAAAGAAGCAATTATTTATTCATATAATAGACACATCAATGGCTTTGCAGCTTTACTTGAAGAGGAAGAAGCATCAGATCTTGCAAAAAACCCAAAAGTAGTGTCTGTATTCTTGAGCAAAGAGCATAAACTGCACACTACCCGTTCATGGGAATTCCTTGGACTTGGACTTAATGGCAATGGTGCCAACTCAGCATGGCAAAAGGGAAGATTCGGTGAAAATACAATTATTGCTAACATTGATACAGGCCCTGTCCCAGCAAAGTGGCGTGGGGGAAACATCTGTCAAATTAACAAACTCCGCGGTTCAAAGAAAGCTCCATGTAACAGGAAACTAATTGGAGCAAGATTCTTCAACAAAGCTTATGAAGCATTTAACGGCAAACTTCATCCATCACAACAAACAGCACGTGACTTTGTAGGCCATGGAACCCATACACTATCAATAGCTGGTGGAAACTTTGTTCCAAATGCAAGTGTATTTGGAAATGGCAATGGTACAGCAAAAGGTGGATCCCCAAGAGCTAGAGTTGCAGCCTACAAAGTGTGTTGGTCTCTAACCGATGCAGCAAGTTGTTTTGGTGCTGATGTGTTAGCTGCTATTGATCAAGCCATAAGTGATGGTGTTGATGTCATCTCTGTTTCTGCTGGAGGCAGAGCTGTCCTTAGTCCTCAAGAAATTTTCACAGATGAGGTTTCCATTGGTGCATTCCATGCACTTTCTAGCAACATATTATTAATTGCCTCTGCAGGGAATGATGGACCAACACCTGGAACTGTTTTAAATGAGGCTCCTTGGGTTTTCACAGTTGCTGCAAGCACAATAGATAGAGACTTCAGTAGTACTTTAACAATTGGTAACAATCAACAAGTCACGTCCTTTTCTCTAATCCTTTCTACCGATGCTAAACTTGCCAATGCTACAAGACGAGATGCTCAACTTTGCAAGCCAGGAACGCTTGATCCTACAAAAGTAAACGGCAAAATAGTGGCATGTGATCGAGAAGGGAAAATAAAATCAGTTGTTGAAGGTCAAGAAGCTCTATCTGCAGGTGCAAAAGGAATGATTTTGGGAAATCAAAAGCAAAATGGGAATACTCTGCTTTCTGAGCCTCATGTTTTGTCTACTGTCAACTATGTAAAAAGACATATAAAAACAAGGCCTGCTCGTTTTGACATAACTGCAATAACGGACTCTACAATAAATTCAAATACTACAATAAGGTTGACCCAAGCAAAAACTTTCCTTGGAACAAGGCCAGCTCCACCTGATGTAACTGACCCTGGTGTGAACATACTTGCTGCCTATTCACTATTTGCAACTGCATCTAACTTACCATCAGATACTCGGCGAGGTTTTCCATTCAATGTGTTGCAAGGAACTTCTATGTCTTGTCCTCATGTTGCTGGCATTGCTGGACTTCTCAAAACTCTTCATCCTGATTGGACAAGCACAAGAGATAACACCAATAAGCCGATACGCGATGCATTTGATAAAACATTGGCAACTCCATTTGCTTATGGTTCAGGACATGTTCAACCTAACAGTGCAATAGATCCTGGGCCTGTTTATGATATAAGCGTCATGGATTACTTGAACTTCTTATGTGCTTCTGGATATGACCAACAACTCATTTCCGCACTTAATTTCAACAAGACATTCATTTGTTTAGGATCTCATAGCTTAACAGACTTGAACTACCCTTCAATCACATTACCAAATCTTGGGTTAAATTCAGTAAGCATTACTCGCACAGTCACCAATGTTGGTCCCCCAAGTACATATTTTGCAAATGTCCAATTGCCTGGGTATAACATTGTTGTTGTGCCAAGTTCCTTGAATTTTAAGAAAATTGGTGAAAAGAAGACATTCCAAGTTATTATACAAGCTAGGAGTGTGACTAAGCGGGGAAATTATCATTTTGGAGAATTGTTATGGACAAATGGAAAGCACAAAGTTAGGAGCCCTATCACAGTTCGACGAAAATGA 2202 0.406 MGRSILYLHLLVSSFLTFTLLLNAAHASKKCYIVYLGAHSHGPTPSSLDLEIATSSHYDLLGSILGSHERAKEAIIYSYNRHINGFAALLEEEEASDLAKNPKVVSVFLSKEHKLHTTRSWEFLGLGLNGNGANSAWQKGRFGENTIIANIDTGPVPAKWRGGNICQINKLRGSKKAPCNRKLIGARFFNKAYEAFNGKLHPSQQTARDFVGHGTHTLSIAGGNFVPNASVFGNGNGTAKGGSPRARVAAYKVCWSLTDAASCFGADVLAAIDQAISDGVDVISVSAGGRAVLSPQEIFTDEVSIGAFHALSSNILLIASAGNDGPTPGTVLNEAPWVFTVAASTIDRDFSSTLTIGNNQQVTSFSLILSTDAKLANATRRDAQLCKPGTLDPTKVNGKIVACDREGKIKSVVEGQEALSAGAKGMILGNQKQNGNTLLSEPHVLSTVNYVKRHIKTRPARFDITAITDSTINSNTTIRLTQAKTFLGTRPAPPDVTDPGVNILAAYSLFATASNLPSDTRRGFPFNVLQGTSMSCPHVAGIAGLLKTLHPDWTSTRDNTNKPIRDAFDKTLATPFAYGSGHVQPNSAIDPGPVYDISVMDYLNFLCASGYDQQLISALNFNKTFICLGSHSLTDLNYPSITLPNLGLNSVSITRTVTNVGPPSTYFANVQLPGYNIVVVPSSLNFKKIGEKKTFQVIIQARSVTKRGNYHFGELLWTNGKHKVRSPITVRRK. 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01613 733 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Seca2g01613 733 Pfam Subtilase family 188 557 IPR000209 GO:0006508|GO:0008236
Seca2g01613 733 Pfam Fibronectin type-III domain 635 730 IPR041469 -
Seca2g01613 733 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 116 IPR037045 -
Seca2g01613 733 SUPERFAMILY Subtilisin-like 116 592 IPR036852 GO:0004252|GO:0006508
Seca2g01613 733 Gene3D - 347 479 - -
Seca2g01613 733 CDD Peptidases_S8_3 113 554 IPR034197 -
Seca2g01613 733 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Seca2g01613 733 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Seca2g01613 733 Gene3D - 606 732 - -
Seca2g01613 733 FunFam Subtilisin-like protease SBT5.3 21 116 - -
Seca2g01613 733 Pfam PA domain 385 436 IPR003137 -
Seca2g01613 733 CDD PA_subtilisin_like 353 448 - -
Seca2g01613 733 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 730 IPR045051 -
Seca2g01613 733 ProSiteProfiles Serine proteases, subtilase domain profile. 120 589 - -
Seca2g01613 733 Gene3D Peptidase S8/S53 domain 152 602 IPR036852 GO:0004252|GO:0006508
Seca2g01613 733 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01613 Seca-Chr2 28575467 28581900 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01613 19 731 Subtilisin-like Serine Gene Family AT5G59810 47.423 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01613 - - gmx:100803751 1171.76