Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01586 ATGGAGGATCATAGAATGGCAATTGAGGAGCTTGTGAGAGGGCGTGAGTTTGCTAATCAGCTTCGACAAATCATCAGTGGTGATGATGAGTCAAGAATATTAGGAACTCCATTTGCTCAACATCTAGTGAAGAATGTGCTCAGATCCTTTACCAACACCATCTTCCTTTTGGACAAATCCCATGAGGTTTCTCATGATCAGATGCAAAAAAGGGACTCTTCCTTGATTAGTAGTCCTGCTAAATCTGAGGACTCTCAAGAAAGTTGCAGGAGTTCCACCGATAAGTGTAGAAGAGGGTGTTACAAGAGAAGAAAAGATACACAAACATATTGGGAGAAAGTGTCAGAAATCCCAGAAGATGATGGCCATCTATGGAGAAAATATGGCCAAAAGGAAATCCTTAATGCCAAATACTCAAGGAGCTACTACAGGTGCACTCACAAGTTTGATCAGAGATGCCAAGCAACAAAACAAGTGCAGAGAATTCAAGAGAAGCCTCCATTGTATAAGACCATCTATTATGGCCACCACACTTGCAAAAACACCTTAAACCCTGACATCATACTTGATCCCAATTCTCCTTCTGACACTTCCATATTACTTAGCTTTAACAACACCTTCCCAACTCCATCCAAACAAGACTGCCCCTTTGTATCATCTCCTCCCTCACAATCAGAGAACAAGGAATGTAAGGAGGATGTTTCCTCATCTTCCTTATTGGATGATGATTACCTGCTCTCCCATGAGCCAACTACTTTTGATAATTTGTACTCAAGGCATGTCACTACTCTATCATCAACCCTTGAATCCGATAACAGGGATCTGTTTTCTAGTTTCTTGTGTGATTCGGTTGTGTTTGATGATGTTTTTCAGCCTTCTGTTCAATTTTGA 891 0.4097 MEDHRMAIEELVRGREFANQLRQIISGDDESRILGTPFAQHLVKNVLRSFTNTIFLLDKSHEVSHDQMQKRDSSLISSPAKSEDSQESCRSSTDKCRRGCYKRRKDTQTYWEKVSEIPEDDGHLWRKYGQKEILNAKYSRSYYRCTHKFDQRCQATKQVQRIQEKPPLYKTIYYGHHTCKNTLNPDIILDPNSPSDTSILLSFNNTFPTPSKQDCPFVSSPPSQSENKECKEDVSSSSLLDDDYLLSHEPTTFDNLYSRHVTTLSSTLESDNRDLFSSFLCDSVVFDDVFQPSVQF. 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01586 296 SMART WRKY_cls 119 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g01586 296 MobiDBLite consensus disorder prediction 67 93 - -
Seca2g01586 296 Pfam WRKY DNA -binding domain 120 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g01586 296 Gene3D WRKY domain 104 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g01586 296 MobiDBLite consensus disorder prediction 70 86 - -
Seca2g01586 296 ProSiteProfiles WRKY domain profile. 120 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g01586 296 SUPERFAMILY WRKY DNA-binding domain 115 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g01586 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 213 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01586 Seca-Chr2 28008126 28010445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01586 7 179 WRKY Transcription Factor Family AT3G56400 38.202 4.84e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca2g01586 WRKY 2.8e-23 CL0274