Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01575 ATGGCAGGTCCAGAAGTTGCAAATGGGAACGGCTCATTGAACTTGAAACCAAGTGACACCAAAGGAAAGACCATTACTTGCAAAGCTGCTGTTGCATATGGTCCGGGACAACCCTTCATGGTGGAACAAATTCTTGTTCATCCTCCTCAGAAATTGGAGGTTCGAATCAAGATTCTCTGTACTTCAATTTGTCACACCGATCTCAGCGCTTGGAATGGAGAGAATGAGTCTCAGCGTGCTTATCCTCGGATTTTTGGGCATGAAGCTTCCGGGGTTGTGGAGAGTGTGGGGGAAGGTGTGAGTGATATGAAAGAAGGGGACATTGTGGTGCCAATATTCAATGGGGAGTGTGGGGAGTGTAGCTATTGCAAGTGTGAGAAAACCAACATGTGTGAGAGGTTTGGGGTGAACCCCATGAAAAAAGTGATGTATGGAGATGGCAAAAGTAGATTCTCCACCATGGATGGAAAACCCATCTTCCATTTCTTGAACACTTCAACCTTCACAGAGTACACGGTGTTGGACTCAGCATGTGTTGTTAAGTTCCAACGTCAATACAATCTCAGCCTCAAAAACCTCACCTTGCTCAGCTGCGGAGTTTCCACAGGAATGGGAGCTGCTTGGAATATTGCAAATGTGCATGTTGGTTCATCTGTAGCAGTCTTTGGTTTAGGTGCTGTTGGCCTCGCTGTTGCAGAAGGGGCACGAGCCAGAGGTGCTTCAAAAATAATAGGTGTGGACATCAACTCAGACAAATTCGTCACAGGTAACTTCCTCTCCTTGGATTTGGCTCCTCTCAATTGTTTATTAGTTTTCATTTTTCATCTTAATATTCTTAATCCATTTTGA 849 0.4488 MAGPEVANGNGSLNLKPSDTKGKTITCKAAVAYGPGQPFMVEQILVHPPQKLEVRIKILCTSICHTDLSAWNGENESQRAYPRIFGHEASGVVESVGEGVSDMKEGDIVVPIFNGECGECSYCKCEKTNMCERFGVNPMKKVMYGDGKSRFSTMDGKPIFHFLNTSTFTEYTVLDSACVVKFQRQYNLSLKNLTLLSCGVSTGMGAAWNIANVHVGSSVAVFGLGAVGLAVAEGARARGASKIIGVDINSDKFVTGNFLSLDLAPLNCLLVFIFHLNILNPF. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01575 282 SUPERFAMILY GroES-like 20 207 IPR011032 -
Seca2g01575 282 Gene3D - 203 253 - -
Seca2g01575 282 PANTHER ALCOHOL DEHYDROGENASE 22 256 - -
Seca2g01575 282 Gene3D - 30 202 - -
Seca2g01575 282 FunFam alcohol dehydrogenase 1-like isoform X1 35 202 - -
Seca2g01575 282 Pfam Alcohol dehydrogenase GroES-like domain 53 147 IPR013154 -
Seca2g01575 282 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 86 100 IPR002328 GO:0008270|GO:0016491
Seca2g01575 282 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 188 253 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01575 Seca-Chr2 27817224 27832141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01575 53 134 Monolignol Biosynthesis Gene Families AT4G39330 36.145 1.39e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01575 K00001 - gmx:100815166 394.43