Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01572 ATGACTGTGTTCATTGCTTTGTTATCTGACTATGTGGAGGATACAATTGAGGATGCATCTGATTCATGGGGTCTGTCTATTAGCTTCCCCAGCATAATCTTGCTACCAATAGTTGGCAATGTAGTTGAACATGCAGGAGCAATCATATTTTCTTTCAAGAACAAGCTGGACAACTCATTAGGTGTTGCATTGGGTTCAGCAACACAAATTAGCATGTTTGTGGTTCCCTTATATATGATTGTGTCTTGGATAATGGGTGTCAAAATGGACCTGAACTTCAACCTCTTAGAGATAGGTTCTCTTGCTTGGGCAATAATAGCCACGAGCTTTACTTTACAGGTATATTAA 348 0.3937 MTVFIALLSDYVEDTIEDASDSWGLSISFPSIILLPIVGNVVEHAGAIIFSFKNKLDNSLGVALGSATQISMFVVPLYMIVSWIMGVKMDLNFNLLEIGSLAWAIIATSFTLQVY. 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01572 115 Pfam Sodium/calcium exchanger protein 2 108 IPR004837 GO:0016020|GO:0055085
Seca2g01572 115 Gene3D - 1 115 IPR044880 -
Seca2g01572 115 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 113 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01572 Seca-Chr2 27804176 27806817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01572 1 114 Antiporters AT3G51860 80.702 3.48e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01572 K07300 - gmx:100816231 175.637