Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01529 ATGGGCGTGGACTACTACAAGGTTCTTCAGGTAGATAGAGGTGCCAGTGATGATGATCTCAAGAAAGCATATCGAAAACTTGCCATGAAGTGGCATCCTGATAAGAACCCTAACAACAAGAAAGAGTCTGAAGCTAAATTCAAGCAAATCTCTGAAGCCTATGATGTTTTGAGTGATCCACAGAAGCGAGCAGTGTATGATCAGTATGGTGAGGAGGGGTTGAAGGGGCAGGTGCCGCCACCGGGTGCCGGTGGATTTCCCGGTGACGGCGGGCCGACATCATTCCGGTTCAACCCCAGAAGCGCAGATGACATATTTTCAGAGTTTTTTGGGTTTTCCAGCCCCTTTGGTGGAATGGGGGACATGGGTGGCCGTGGTGGTCCCTCTGGATTTTCCAGGGGTGGCATGTTTGGTGAAGATATTTTTGCTCAATTTAGGAGTGGAGCTGGAGAGGGCTCTGGGCATATGCCAAGGAAAGGTGCTGCTATTGAGAAAACATTGCATTGTAGTTTGGAGGATTTGTATAAAGGGACTACCAAAAAAATGAAGATCTCAAGGGATGTTAGTGATTCCAGTGGGAGGCCCACCACTGTAGAGGAAATCCTTACAATTGAGATCAAGCCAGGCTGGAAGAAAGGAACCAAAATAACTTTTCCAGAAAAAGGAAATGAACAGAGAGGAGTTATCCCTGCAGACCTTGTATTTATAATTGATGAGAAACCTCATAGTGTGTTTAAGAGAGATGGCAATGACCTTATTGTCACCCAGAAGATATCTCTTGTAGAAGCTTTGACAGGTTATACAGTACAGCTGACAACCCTTGATGGGCGGAATCTTACAATCCCAATTAACTCCATCATTAGTCCAACATATGAAGAAGTTGTTAAAGGAGAGGGTATGCCCATTCCAAAAGAACCTTCCAAGAAGGGGAACTTGAGAATCAAGTTCAATATCAAGTTTCCTTCCAGACTTACATCAGAACAGAAAAGTGGCATTAAGCGATTGTTGACATCTCCATAA 1020 0.4461 MGVDYYKVLQVDRGASDDDLKKAYRKLAMKWHPDKNPNNKKESEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPPGAGGFPGDGGPTSFRFNPRSADDIFSEFFGFSSPFGGMGDMGGRGGPSGFSRGGMFGEDIFAQFRSGAGEGSGHMPRKGAAIEKTLHCSLEDLYKGTTKKMKISRDVSDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGVIPADLVFIIDEKPHSVFKRDGNDLIVTQKISLVEALTGYTVQLTTLDGRNLTIPINSIISPTYEEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKSGIKRLLTSP. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01529 339 MobiDBLite consensus disorder prediction 73 94 - -
Seca2g01529 339 SMART dnaj_3 3 62 IPR001623 -
Seca2g01529 339 CDD DnaJ 4 59 IPR001623 -
Seca2g01529 339 Gene3D - 242 322 - -
Seca2g01529 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
Seca2g01529 339 Pfam DnaJ C terminal domain 163 321 IPR002939 -
Seca2g01529 339 Gene3D DnaJ domain 3 123 IPR036869 -
Seca2g01529 339 Pfam DnaJ domain 4 67 IPR001623 -
Seca2g01529 339 FunFam Dnaj homolog subfamily b member 159 240 - -
Seca2g01529 339 FunFam DnaJ subfamily B member 13 242 322 - -
Seca2g01529 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 244 330 IPR008971 GO:0006457|GO:0051082
Seca2g01529 339 Gene3D - 161 240 - -
Seca2g01529 339 FunFam DnaJ subfamily B member 13 3 120 - -
Seca2g01529 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Seca2g01529 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Seca2g01529 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Seca2g01529 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Seca2g01529 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Seca2g01529 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 242 IPR008971 GO:0006457|GO:0051082
Seca2g01529 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Seca2g01529 339 CDD DnaJ_C 163 324 - -
Seca2g01529 339 SUPERFAMILY Chaperone J-domain 3 119 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01529 Seca-Chr2 27130777 27134497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01529 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 9.20e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01529 K09510 - gmx:100818358 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10782 4 244981548 244986364 Seca2g01529 2 27130777 27134497 PCT