Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01526 ATGGGTTCCACTCGCTCAGATGGCTCTGCTACTGGCAAAGAACGCCTACGCTGGACACAACAACTCCATGACCGGTTTGTGGAGGCTGTAAATAGGCTTGGGGGTCCTGATAGGGCAACACCGAAAGGTATATTGAAGGGAATGAAGGCTATGGGTGTTTCTGAATTAAACATTTATCACGTTAAAAGCCACTTGCAGAAATACAGGCTTTCCAAATTGATTCCAGAGTCCACCACAAGAGGAAAGTTTGAGAAGAGAAACATATCAGATATACTACCAAATTTTAGTTCTATATCTAGCGCTCTTCAGCTAAAGGAAGTTCTTCAAATGCAGACAGAGGTGCATAAACGCTTGAATGATAAAGTAGAGGTTCAAAGGAGCTTGAAGCTAAAAATTGAAGCACAAGGAAAGTACCTGGAGAGAATTAGTCAAAGCTATCATAGCAGAACAATTACTGGAAAAGCTTGCAACAAGCCTTTTGTTGCTGCAGCTAAACCTCTACCTTCTCTTTCTGAGGAATCCGAATCATTGGAAACACAACCTGAGGAAGAGCATAGATCAACTAAAAAACAGAGGGTTGCAGAGGAGGGTGTTTTTTCAACAAGTTTTGAACTAGGATCATCCACCACCCCAGAATTCTACAACCAAACCTGGAATCATTCTTGGAGTCAGATTGCTGCAGCATCATGCAATTCAAATTTGGTGCCTGGTTTCTTATTATAA 723 0.4163 MGSTRSDGSATGKERLRWTQQLHDRFVEAVNRLGGPDRATPKGILKGMKAMGVSELNIYHVKSHLQKYRLSKLIPESTTRGKFEKRNISDILPNFSSISSALQLKEVLQMQTEVHKRLNDKVEVQRSLKLKIEAQGKYLERISQSYHSRTITGKACNKPFVAAAKPLPSLSEESESLETQPEEEHRSTKKQRVAEEGVFSTSFELGSSTTPEFYNQTWNHSWSQIAAASCNSNLVPGFLL. 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01526 240 MobiDBLite consensus disorder prediction 168 193 - -
Seca2g01526 240 Pfam MYB-CC type transfactor, LHEQLE motif 103 142 IPR025756 -
Seca2g01526 240 Gene3D - 12 73 - -
Seca2g01526 240 NCBIfam myb-like DNA-binding domain, SHAQKYF class 13 71 IPR006447 GO:0003677
Seca2g01526 240 Pfam Myb-like DNA-binding domain 16 69 IPR001005 -
Seca2g01526 240 SUPERFAMILY Homeodomain-like 12 70 IPR009057 -
Seca2g01526 240 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 73 IPR017930 -
Seca2g01526 240 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 189 IPR044848 GO:0003700
Seca2g01526 240 MobiDBLite consensus disorder prediction 179 193 - -
Seca2g01526 240 FunFam Two-component response regulator 9 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01526 Seca-Chr2 27056544 27061989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01526 9 186 G2-like Transcription Factor Family AT4G28610 42.778 1.82e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca2g01526 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01526 - - psat:127127459 313.538