Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01519 ATGAATTCATCAATGGTTTATGATGTCGCCCCGTTTTTGCATGATCATCCAGGAGGTGATGAATCTTTATTGTCATCAACAGAGAAGGATGCCACCGTTGATTTTGAAGATGTGGGCCACAGTGACTCTGCAATAGAAATGATGGAAAAATACTTTGTTGGGAATGTTGACAGCTCCACCCTTCCAACTAAAGTTAACCACATTCCGCCACCACTCACACGTGGTGATAGCAATCAATCTTCAGGATTTGTTGCAAAGACTTTGCAATTCCTGCTGCCATTGTTGATATGGCCTTTGCATTTGCTAACCATTATTACTAACCATTACTTCAATAAGACTATTAATGCACATTATTATTTTTATCAATTATTTATATTTATTATTTTTTCAGGAAAATTTGACCCAAGATGA 411 0.3674 MNSSMVYDVAPFLHDHPGGDESLLSSTEKDATVDFEDVGHSDSAIEMMEKYFVGNVDSSTLPTKVNHIPPPLTRGDSNQSSGFVAKTLQFLLPLLIWPLHLLTIITNHYFNKTINAHYYFYQLFIFIIFSGKFDPR. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01519 136 Pfam Cytochrome b5-like Heme/Steroid binding domain 5 56 IPR001199 -
Seca2g01519 136 SMART Cyt_b5_2 1 57 IPR001199 -
Seca2g01519 136 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 57 IPR001199 -
Seca2g01519 136 Gene3D - 2 65 IPR036400 -
Seca2g01519 136 PRINTS Cytochrome B5 signature 16 30 IPR001199 -
Seca2g01519 136 PRINTS Cytochrome B5 signature 31 38 IPR001199 -
Seca2g01519 136 PRINTS Cytochrome B5 signature 44 56 IPR001199 -
Seca2g01519 136 PRINTS Cytochrome B5 signature 6 16 IPR001199 -
Seca2g01519 136 PANTHER CYTOCHROME B5 5 98 - -
Seca2g01519 136 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 12 19 IPR018506 GO:0020037
Seca2g01519 136 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 67 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01519 Seca-Chr2 26819898 26820811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01519 3 112 NADPH P450 reductases AT5G53560 52.727 1.76e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01519 K23490 - gmx:100788796 124.02