Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01514 ATGGAAACCATTACAATACCATATGTTGGTATGGAATTTGATGATGCAGAAAAAGCATGGGAGTTTTGGGTTGAATATGGTAAAAGAGCTGGCTTTGGAGTTAGAAAACTTTACTTAAACAAAAGGAAGAAAGATGGATTCATTAGATCATGTAGATTTGTTTGTTGTAAAGAGGGTTATCGAAAAACGGACAAGAGATCCTTTTTGGTTAAAAATCCTAGGGCTGAGACAAAAACTGGATGCGAAGCAAGAATTGGACTTTGCGAAAAGAATGGGAAGCTTGTAATCCACGAGTTCATGGAGGCCCATAACCACCCTTTACAGCTTGCAGAAACAACACATATGCTAGCATCACACCGTAAAATAACTAAGGTTCAAGCATATGAAATTGAAATGGCAGAGGACTCTGGATTGGCGCAAAAGGCTTCATTTCAGCTTATGAGTGCACATGCAGGAAATAGAGCTAACCTTGGATATACACGATTAGATGCCAAAAACTATCTCAAAGCAAGAAGACAACGCAATATGGTATATGGGGAAGCCGGTAGTCTTATGCAGTATTTTCAACGCCAACAATTGGAGAATCCATCATTTTACCATGCATATCAAATGGACTGTGATGAACAAATCACACATGTATTTTGGGCTGATGCAAAAATGATTTTAGATTATGGATATTTTGGTGATGTGATCTCTTTGGATACAACTTATTGTACTAATCGTGCTAATAGACCATTGGCATTGTTTTCAGGCTTCAACCATTATAGGGGAACAATCATTTTTGGGGCTGCACTGTTGTATGATGAAACGGCTGAATCGTTTAAATGGTTATTTGAAACATTTCTTGAAGCGCATGGGAATAAAAAGCCTCAAACTTTGTTTACTGACCAAGACAAAGCAATGGCTAAAGCACTAGCTGAGGTGATACCAGAGACTCGACATGGCTTATGCACATGGCACTTGATGCAAAATGGGATCAAACACCTTGGTAACTTAATGAAAAGAGGAAGTCATTTCTTGACTGACTTTAAAAAGTGCATGTATGATTATGACCAAGATGTGAAATTTGAGGTAGCTTGGAGCAAGTTGCTAGCTGAATATAATGTTAGCGAAAACAATTGGGTGAAATCAGTGTATGCTATCAAAGAAAAATGGGCAGCATGTTACATGAAGGAAGCACTCACCTTGGGAATGAGAAGCACTCAACTTAGTGAGAGTTTGAACTCAAATTTTAAGGCTTGTATGAGACCTGATGTGAATGTCGTCCAATTCTTTAAGGACTTTGAGGGAGTTGTTGAGGAGAAACGATATAAAGAGTTAGTCTGTGAATATGAGTCTCGACATAAACTACCAAAGTTGAGATATAATCATTCACCAATTCTAGTGCAACTTGCACAAGTATACACATATAAAATCTTTGACATATTCCATGATGAGTTTGCCTTATTTTTAGCTGCTTGCATACAAGAGAGAAATGTATCTCAACTTCCATTTGAATATGTGATCACCTTGGTCAATGAGGAAGGAACATGGAGAGTGTTATTTGATCCTATGCAGTGCTTCATATCTTGCAGCTGTAGAAAATTTGAGACTTTCGGAATACTTTGTTGCCATGCATTAAAGGTTTTTGAGGCAAATGATGTTAAACTTGTCCCCGATCAATACATCCTAAAAAGATGGACAAGAGATGCACGCAATGGTATTATACATGATGTAAGGAGAAATGAGGTTGTGGCGGATCCCAAACTATGTAGCACACAATGGTATAGGCAACTTTGCTGCACTATGATTAGGTTGGCAGCTGAGGTATCAGATTCTGAAAAATTAAACCAACTTGTGGAGAAAGGGGTGCATGATTTGTGGAAGCAGGTGATGGAGATTCGGTTACAAGACAAAGCAAATGAATATGGTGAAGATGATGTCCCAACACTAACACAAGCAAAGGGGTTCAAGCATAGAGCTGGGTTAAAAAGGCATAAACGGTTAAAGAGTTGGGTTGAGCTTCAAACTAAACAAAAAAGAACTCCAACTATAAGACCTGCACCAAGTCAACATTCCAGGGTACATAAATTTATGCTTATAGCAACTTTCGTTTAA 2097 0.382 METITIPYVGMEFDDAEKAWEFWVEYGKRAGFGVRKLYLNKRKKDGFIRSCRFVCCKEGYRKTDKRSFLVKNPRAETKTGCEARIGLCEKNGKLVIHEFMEAHNHPLQLAETTHMLASHRKITKVQAYEIEMAEDSGLAQKASFQLMSAHAGNRANLGYTRLDAKNYLKARRQRNMVYGEAGSLMQYFQRQQLENPSFYHAYQMDCDEQITHVFWADAKMILDYGYFGDVISLDTTYCTNRANRPLALFSGFNHYRGTIIFGAALLYDETAESFKWLFETFLEAHGNKKPQTLFTDQDKAMAKALAEVIPETRHGLCTWHLMQNGIKHLGNLMKRGSHFLTDFKKCMYDYDQDVKFEVAWSKLLAEYNVSENNWVKSVYAIKEKWAACYMKEALTLGMRSTQLSESLNSNFKACMRPDVNVVQFFKDFEGVVEEKRYKELVCEYESRHKLPKLRYNHSPILVQLAQVYTYKIFDIFHDEFALFLAACIQERNVSQLPFEYVITLVNEEGTWRVLFDPMQCFISCSCRKFETFGILCCHALKVFEANDVKLVPDQYILKRWTRDARNGIIHDVRRNEVVADPKLCSTQWYRQLCCTMIRLAAEVSDSEKLNQLVEKGVHDLWKQVMEIRLQDKANEYGEDDVPTLTQAKGFKHRAGLKRHKRLKSWVELQTKQKRTPTIRPAPSQHSRVHKFMLIATFV. 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01514 698 SMART 26again6 522 549 IPR006564 GO:0008270
Seca2g01514 698 Pfam SWIM zinc finger 520 545 IPR007527 GO:0008270
Seca2g01514 698 ProSiteProfiles Zinc finger SWIM-type profile. 500 547 IPR007527 GO:0008270
Seca2g01514 698 Pfam MULE transposase domain 230 324 IPR018289 -
Seca2g01514 698 Pfam FAR1 DNA-binding domain 21 108 IPR004330 -
Seca2g01514 698 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 623 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01514 Seca-Chr2 26694170 26696266 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g01514 MULE 6.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01514 - - smil:130990021 863.988