Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01513 ATGGCTAAACCAGATAATGAAAAATCTGGGTGTTTCTCTAGCTTCTTTCACCTACTTCTTTGTGCTGAGAATGGAAATAGTTCTCCATTACCATTACACCCTTCTGATCACATTACAGAATCATATGTAACAGAACTAGTGCATCCAAATAAGGACTCAAATACAATTGTCAATGAAGCTAAACCAGGAGTGGTGGCTAGGCTAATGGGGCTTGATTCATTGCCAAATACCAACTTGGTATCAAAAGGAAGTGCCCCAGATTTAGTTCCAAGAAGTAGGTCAGTGAACTTTGTGGACTATTTGCTGAAGTTTGATGTAAGCCAAGACAACCATCACAAAGTGAAAAGCTCAGCATCATTTAGAGAGGTTCCTGCACCATTTCAGAAGAAAAATCATGATGTTCTTGTGCTTTACTTGGGTAGTGGGAGTGAAGATCACAAAGTTGGATCCAATTTGAGGAAACAAGAAATGGGGTTTGGAGAATTGAGACAGAGGAAGAAGCAGGGGAGCAAGAATAAAGAGATTGTTAAAGAGAGGAGTATTGTGACAAAGGAGAGGAATCATGGGAAGAACAAGAGAATTTCCAAGTTCAAGAATGAGCCTATAATGGTCCCTGTTAAGCATAGTTCAAAGGTTAGAAATCATAATGAAGCTAAAGTTTTGGCATCAGTTTCAGCAAACTCCAAGAATTGTAGTTACAGAAAAAGTAGTACTGGGTCAAGATCAAGATCAACATTGCCAAATAAGCAGAAGAAAGTGTTATCAGAACCAAAACAGAAGAAAAATATGAGAAAACAGCAATCACCAAAGAAGACAGAGACTCAATACAGCTCAGAAAATTTCAGTCCAATTTCAGTCCTAGACAACAATGATTACCAATTCCTTTATGGACCTGATTTTCTAGATTACACAAGTCCCTTGGTGTCACAGTCAAAGTGGGAATTTTCAGAGCTGCTGTTTTTGGGTGATAGTGTTGAAGAGCGAGGAAGCAAGAATAAAGGCTATGTCTACCCTGACATCAACAGGGAAAAAGAGTGTTTATCAGAATTGATGCTGAAGCTTCGAACATTAATAGAAAATGATATGAGAGAATTTGATTGCACGCAAAAGCGTATGACTGAGACTGAGATTTTGGAGGAAATTTGTTTTGTGTGTGAGCATAAAATTTTTGACATTTTATTACATGAGGTTGTCAATGAACTTGTAGAACTTTCATATTGA 1221 0.3776 MAKPDNEKSGCFSSFFHLLLCAENGNSSPLPLHPSDHITESYVTELVHPNKDSNTIVNEAKPGVVARLMGLDSLPNTNLVSKGSAPDLVPRSRSVNFVDYLLKFDVSQDNHHKVKSSASFREVPAPFQKKNHDVLVLYLGSGSEDHKVGSNLRKQEMGFGELRQRKKQGSKNKEIVKERSIVTKERNHGKNKRISKFKNEPIMVPVKHSSKVRNHNEAKVLASVSANSKNCSYRKSSTGSRSRSTLPNKQKKVLSEPKQKKNMRKQQSPKKTETQYSSENFSPISVLDNNDYQFLYGPDFLDYTSPLVSQSKWEFSELLFLGDSVEERGSKNKGYVYPDINREKECLSELMLKLRTLIENDMREFDCTQKRMTETEILEEICFVCEHKIFDILLHEVVNELVELSY. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01513 406 MobiDBLite consensus disorder prediction 230 278 - -
Seca2g01513 406 PANTHER OS05G0128300 PROTEIN 1 405 - -
Seca2g01513 406 Pfam DUF761-associated sequence motif 62 78 IPR032795 -
Seca2g01513 406 MobiDBLite consensus disorder prediction 163 188 - -
Seca2g01513 406 MobiDBLite consensus disorder prediction 163 215 - -
Seca2g01513 406 MobiDBLite consensus disorder prediction 253 268 - -
Seca2g01513 406 MobiDBLite consensus disorder prediction 230 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01513 Seca-Chr2 26689065 26691027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01513 1 401 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 28.205 4.02e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01513 - - gmx:100775965 493.041