Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01502 ATGGGTACAAACTTGATTCTCAAAGTTGGTCTTGAATTCGATAATTTAGAAGACGCATGGCAATTTTGGGTGAACTACGGAGGTATAAAAGACTTTGGAGTTAGAAAACAATATTCAAGCAAGAGTAAGAAAGATGGTTCAATTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACGAAAACCAAACTCAGGGGATTATAAAACGACCATTCCAGAACCCGAGACAAGAACGAGGTGTATGGCAAGAATGAAAGTCAAACCATTCAATGGAAAAATACAGAGTAATTAA 294 0.3639 MGTNLILKVGLEFDNLEDAWQFWVNYGGIKDFGVRKQYSSKSKKDGSITSYLYVCCKEGVRKPNSGDYKTTIPEPETRTRCMARMKVKPFNGKIQSN. 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01502 97 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 89 - -
Seca2g01502 97 Pfam FAR1 DNA-binding domain 21 88 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01502 Seca-Chr2 26515536 26515829 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca2g01502 FAR1 8.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01502 - - vun:114184605 143.665