Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01487 ATGCTCAGTTTTGTTTGTGGAAAGCTGGAAACTGCACCGTTGACTTTCCGTGTTAGAGTCTGCGAGCAATTCAAACATGATCTAGGCAAGGTTGATCGATGGAAGAATGCAATGACCAATTTGACCGAATTAGCTGGCTGGGATGTCAGGAATAAAAAGAAGATTTTGAGAAATCAGAAGACCTCTTCGAGAAATCAGAAAGAAGACTTCAAGAAATCCAAAGACAGGATTTCGAAAAATCTGAACACAAGTTTTCGAAGAAACAGAAGTCACAAGACACCAAAGGAGCAGTTAGAGGAAGTTACAAATGACAAAGACAGAAAAGCCTTCAAAAGTGATTATCCAACAAGCAAATATGATGTTCAATGTCTTCCATTAGCAATTAAAGTATTGGGTTCTTTTTTGTGTCATCGGGAGGTTCCCGAATGGAGAGCTGCCCTAGAAAGACTTGAGAATAATCCAGACAAAGGAATTATGGATGGGCTTCGCATAAGTTATGATGGACTGAATTGTGATAAAAAAGAAATATTTCTGCATATTGCTTGTTTCTTTAAGGGGGAGAGGGAGGATTATGTGAGGCGAATTCTAGATTGTTGTCGATTATACCCTAATATTGGAATTCCGGAAGCAGTAAATGTTAAAGCCATAGTTCTAAATCAAAAAGAGGATGGTTTCAAATGCAGAAGGCCCATATCTCTTTCAAATGAGCTTCATTATCTTTCATGGAAGGATTACCCTTTCACTTTTTTGCCACCGACTTTTGAGCCATATCAACTTGGTGAATTGAATATGCCTAATAGTAAAATCCAACACCTATGGGGAGGCATTGTGGAACTACCCTATTTGAAAAGGATGGATTCAAGCAACTCCAAAAATCTCGAGAAGACCCCAAGTTTTGAAAGGATCAAAAATCTTGTGCGACTAGATTTTATGGGATGCATAAACTTGTGGCAAGTCCATCCATCAATTGGACTTCTTACAAAACTTGAATTCTTGAGTTTGGAGAATTGTAGCAGTTTGGTTAGTCTCGATTTTGGAAATAGATCATCACGATTAGGGGTGTTCAAATCCAATCCAATCCAATTGGAACCGCAATAA 1098 0.3834 MLSFVCGKLETAPLTFRVRVCEQFKHDLGKVDRWKNAMTNLTELAGWDVRNKKKILRNQKTSSRNQKEDFKKSKDRISKNLNTSFRRNRSHKTPKEQLEEVTNDKDRKAFKSDYPTSKYDVQCLPLAIKVLGSFLCHREVPEWRAALERLENNPDKGIMDGLRISYDGLNCDKKEIFLHIACFFKGEREDYVRRILDCCRLYPNIGIPEAVNVKAIVLNQKEDGFKCRRPISLSNELHYLSWKDYPFTFLPPTFEPYQLGELNMPNSKIQHLWGGIVELPYLKRMDSSNSKNLEKTPSFERIKNLVRLDFMGCINLWQVHPSIGLLTKLEFLSLENCSSLVSLDFGNRSSRLGVFKSNPIQLEPQ. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01487 365 Gene3D Ribonuclease Inhibitor 205 352 IPR032675 -
Seca2g01487 365 SUPERFAMILY L domain-like 230 346 - -
Seca2g01487 365 Gene3D - 120 170 IPR042197 -
Seca2g01487 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 180 IPR027417 -
Seca2g01487 365 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 108 343 IPR044974 GO:0006952
Seca2g01487 365 PRINTS Disease resistance protein signature 121 135 - -
Seca2g01487 365 PRINTS Disease resistance protein signature 324 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01487 Seca-Chr2 26163207 26169382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01487 232 343 WRKY Transcription Factor Family AT5G45050 37.500 7.75e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01487 - - psat:127131100 184.111