Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01453 ATGACCAGTCGCGCCTCCGCGATCAGCCGCCCCCTCCGCCCTCTGCGCATCCACGATCAGCCGCCCTCTGCCCGCTTTGCAATTCACCCTCTACTCTGTGTATTTCCATCTCTGTATTTTGGCTTGGGAAATGTCTTTGGCTTGGGAAATGGAACTGCCAAAGGTGGTTCTCCTAAAGCCAGGCTTGCTACTTACATGGTTCAAGAAATATATGAGCTTTCTGCTGAGTATGAAGGAAAGCATGATCCTAAGAAACTGGAAGAACTTGGAAATGTGATAACAAGTTTGGATGCAGGGGACTCTATTGTTGTTTCCAAGTCCTTTTCTCACATGCTTAACTCGGCCAACTTAGCTGAAGAGGTCCAGAATGCTCGCCGCAGAAGGAACAAGTTGAAGAAAGGGGATTTTGCAGATGAGAGCAATGCAACTACAACAAATTTTTTCTAG 447 0.472 MTSRASAISRPLRPLRIHDQPPSARFAIHPLLCVFPSLYFGLGNVFGLGNGTAKGGSPKARLATYMVQEIYELSAEYEGKHDPKKLEELGNVITSLDAGDSIVVSKSFSHMLNSANLAEEVQNARRRRNKLKKGDFADESNATTTNFF. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01453 148 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 66 137 IPR015813 GO:0003824
Seca2g01453 148 Coils Coil 114 134 - -
Seca2g01453 148 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 66 144 IPR021135 GO:0006099|GO:0008964|GO:0015977
Seca2g01453 148 Pfam Phosphoenolpyruvate carboxylase 65 136 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01453 Seca-Chr2 25216501 25217882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01453 44 67 Subtilisin-like Serine Gene Family AT5G59810 79.167 2.66e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01453 K01595 - gmx:100805069 142.51