Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01442 ATGAGAGGCTTTTATAGATGCTTCCAGAGTATTGCTACACAAGTCTCATTATATGTTGAAGGAAAGCTTCTTTTCAGTTTGATTGATTCTGATCGGAATACTTGCCGTACAAATTCAGTTGCTGCCATTTGCTACTCTCTTATGGTTGACAGCTTCACTTGTCCGTTAACCATGTCACGTGTAGTTTGGTCCATATGGCTTGTCTTGTTTCTTCTCCTCACTACAAATTTGTTGTGGTTTCATCCCAAAAGAACTGCTTTGGCCTTAGGAAACAAAACTGATTACTCTGCACTACTCAAATTCAAAGAATCAATATCCGAAGACCCTTTTGGAGTGCTGGCCTCTTGGAATAGCTCTAGCCAATTTTGCAACTGGCATGGAGTCACATGCAGCCACCGACATCAAAGAGTTATAAAGTTGAACCTAACAGGATATAACTTGCAGGGATTCATATCACCCCACATTGGGAACCTCTCATTTCTAAGAATCCTCCAACTTAAAGACAATAGTTTCCATGGTGAAGTCCCAAAAGAATTGGGTCGTTTATCCCGACTACAGGAGCTCTATTTCTCCAATAACACATTATTAGGAGGAGAATTTCCCATCATCTTGACAAATTGCTCTGAACTAAGAGTGTTGAGTTTATGTGGGAATCGATTCATTAGTGAAATACCAATGGAGATTGGTTCCTTTAGCAAGCTTGAGTGGTTGGATTTTTATGATAACAATTTAACTGGACAAATCCCAAGTTCTATAGGAAATCTGTCTTTCCTCACTACTCTTGACATGGGTCCTAATAACTTGGAGGGAAATATACCACAAGAAATAGGCCATTTGAAAAACTTGGGATTTTTTGGTGTGGCAATCTGTAATTTATCTGGTAACCTTCCTTCTTCCTTTTACAATTTGTCATCTCTCACTACCATATCAATAGCAGCTAATCAATTCCAAGGTTCTCTCCCAGCCAACATGTTCCTCACCCTCCCTAATCTTGGGAAATTACTTATTGGTGGGAATCAATTCTCAGGTCCAATCCCAAATTCCATCACTAATGCATCTGGGATACAAAAACTAGGTATTAACCACAACCATTTTGTAGGACAAGTCCCAAGTCTAGAGAATCTACTAGATATTTCAATGCTAAAACTAGCATTTAATAATCTTGGTAGTAATTCATCTAATGACTTGCAGTTTCTAAAGTCCTTGACAAATTGTAGTCAGCTAAATATATTGGACATAGCCTCTAATAATTTTGGAGGGTCTCTACCTAATTTTATGGGCAATTTTTCCACCAAACTCACTAGACTAGTTCTTGGTGGCAATCAAATAATTGGAAAAATCCCAATGGAATTAGGAAATCTTGTTGACTTAATTGCCATTGGTATGGAAAACAATAACCTAATCGGGATGATTCCATCTACTTTAGGTAAGCTTCAAAATTTGCAAGTATTATCTTTGGGAGGAAATCGATTGTCTGGAGAGATACCATCATTCATAGGGAATCTCACTCAGTTGTTTGAATTGGAATTATCAATTAACAAGTTTGTTGGGAATATTCCTCAAACAATTGGAAATTGTACTCATTTAGGATTTCTACACCTTGCAGATAATAGCCTTAGTGGAGCTATACCTTCACAGTTGTTCGGAATTTCCTCTCTATCAATTCTATTAGACGTATCGTATAACTCATTTAGTGGAAATCTACCAACAGAGGTGGGCATGCTAAAAAGTATTAATGAGTTGCATTTTTCTGAAAACTATTTCTCCGGTCGCATTCCCGAAACCATTGGAGAATGCATAGCCTTGGAGAAGCTTACTATGAAGGGGAATTCCTTCAATGGAAGCATACCAGATTCATTGGCTTCACTGAAAGGTCTTCGACTATTAGATTTGTCAAGAAACAACTTATCTGGATCAATTCCAAAAGGACTACAAAACATTCCTTTAGAATACTTTAATGCTTCCTTTAACAAATTGGAGGGTGAGGTGCCAACAAATGGTGTTTTTCACAATGCAAGTGCAATTTCAGTGATAGGAAATGACAAGCTTTGTGGTGGGATATCTGAACTAAAGCTTCAACCTTGCCCCTTGAATTCCACAAAAAGGAGAAACCATCATAATCTTAAACTAATAGTATTAGTGATATTATGTTTGGTTGTATTTCTTCTTATACTATCTTGTATCCTTGCTATATATCTGATAAGGAAAAGGCACAAAAAGGCATCTACAAATTCTACAATTGATCAATTTCCTAAGGTGTCATATCAAAACCTACACCAAGCAACTGATGGGTTCTCAACTGAAAACTTGATAGGGATGGGGAGTCATGGATCTGTTTACAAAGGATTTTTTGAATCAGAAGAAAGAGTTGTCGCTATAAAGGTTCTAAACCTTCAAAAGAAAGGTGCTCCAAAAAGTTTTATTTCTGAATGCAATGCACTTAAAAATATTCGACATAGAAATCTAGTGAAGATTGTCACATGTTGCTCTAGTATGGATTACAATAGAAAAGATTTTAAAGCTCTAGTTTTTGAGTACATGTCAAATAAAAGCTTAGAGGAATGGTTGCATCCAGAGAATAGAAATGCAGAACAACAGAGAATAATATTGACCCTGGAGAAAAGATTAGATATTATTATTGGTGTTTCTTCTGCAATACACTATCTTCACCATGAATGTCAAGAGTCAATTATTCATTGTGACTTAAAGCCAAGCAATGTTCTTCTTGATGAGGACATGGTTGCTCATGTGAGTGATTTCGGCTTAGCAAGAATTCTCTCAGCAATTGACAGTAACCTTCACAATCAAAACAGTACAAGTGGAATAAAGGGGACTATAGGTTATGCTCCCCCAGAGTATGGAGCAAGTTCTCAGGTTTCAACAAAAGGTGACATGTATAGCTTTGGTATTCTTATTTTGGAGATGTTGACTGGGAAACGACCAACAGAGGAAATGTTTAAAGATGCATACAACCTCCATAACTATGTTAAAAATGCATTTCCAAATAACATATTGCTGATCATTGATGCAACTCTTCTCTCAATGGAAAATGAACATCCTACAGTAACACTAGCAGAAGAAAACAACCTGTCTGAGATTGCAAATAATATGCATCCTAATGCTGAAAAGTGCTTGTTTTCACTATTTAAGATTGGTCTTGCTTGTTCAGTGGACTCACCAAGAGAAAGAATGGATATGATGGAAGTCATCAGGGAGCTAAATATAATAAGAAATGCTTTCTATGCTTGA 3249 0.3678 MRGFYRCFQSIATQVSLYVEGKLLFSLIDSDRNTCRTNSVAAICYSLMVDSFTCPLTMSRVVWSIWLVLFLLLTTNLLWFHPKRTALALGNKTDYSALLKFKESISEDPFGVLASWNSSSQFCNWHGVTCSHRHQRVIKLNLTGYNLQGFISPHIGNLSFLRILQLKDNSFHGEVPKELGRLSRLQELYFSNNTLLGGEFPIILTNCSELRVLSLCGNRFISEIPMEIGSFSKLEWLDFYDNNLTGQIPSSIGNLSFLTTLDMGPNNLEGNIPQEIGHLKNLGFFGVAICNLSGNLPSSFYNLSSLTTISIAANQFQGSLPANMFLTLPNLGKLLIGGNQFSGPIPNSITNASGIQKLGINHNHFVGQVPSLENLLDISMLKLAFNNLGSNSSNDLQFLKSLTNCSQLNILDIASNNFGGSLPNFMGNFSTKLTRLVLGGNQIIGKIPMELGNLVDLIAIGMENNNLIGMIPSTLGKLQNLQVLSLGGNRLSGEIPSFIGNLTQLFELELSINKFVGNIPQTIGNCTHLGFLHLADNSLSGAIPSQLFGISSLSILLDVSYNSFSGNLPTEVGMLKSINELHFSENYFSGRIPETIGECIALEKLTMKGNSFNGSIPDSLASLKGLRLLDLSRNNLSGSIPKGLQNIPLEYFNASFNKLEGEVPTNGVFHNASAISVIGNDKLCGGISELKLQPCPLNSTKRRNHHNLKLIVLVILCLVVFLLILSCILAIYLIRKRHKKASTNSTIDQFPKVSYQNLHQATDGFSTENLIGMGSHGSVYKGFFESEERVVAIKVLNLQKKGAPKSFISECNALKNIRHRNLVKIVTCCSSMDYNRKDFKALVFEYMSNKSLEEWLHPENRNAEQQRIILTLEKRLDIIIGVSSAIHYLHHECQESIIHCDLKPSNVLLDEDMVAHVSDFGLARILSAIDSNLHNQNSTSGIKGTIGYAPPEYGASSQVSTKGDMYSFGILILEMLTGKRPTEEMFKDAYNLHNYVKNAFPNNILLIIDATLLSMENEHPTVTLAEENNLSEIANNMHPNAEKCLFSLFKIGLACSVDSPRERMDMMEVIRELNIIRNAFYA. 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01442 1082 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 202 402 - -
Seca2g01442 1082 ProSiteProfiles Protein kinase domain profile. 765 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01442 1082 SMART serkin_6 765 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01442 1082 SUPERFAMILY L domain-like 431 685 - -
Seca2g01442 1082 SUPERFAMILY Protein kinase-like (PK-like) 741 1074 IPR011009 -
Seca2g01442 1082 PANTHER OS04G0122200 PROTEIN 163 282 - -
Seca2g01442 1082 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 847 1082 - -
Seca2g01442 1082 Gene3D Transferase(Phosphotransferase) domain 1 847 1080 - -
Seca2g01442 1082 Gene3D Phosphorylase Kinase; domain 1 729 846 - -
Seca2g01442 1082 FunFam Inactive leucine-rich repeat receptor-like protein kinase 403 695 - -
Seca2g01442 1082 ProSitePatterns Serine/Threonine protein kinases active-site signature. 897 909 IPR008271 GO:0004672|GO:0006468
Seca2g01442 1082 Gene3D Ribonuclease Inhibitor 243 304 IPR032675 -
Seca2g01442 1082 SMART LRR_typ_2 231 255 IPR003591 -
Seca2g01442 1082 SMART LRR_typ_2 158 182 IPR003591 -
Seca2g01442 1082 SMART LRR_typ_2 303 327 IPR003591 -
Seca2g01442 1082 SMART LRR_typ_2 623 646 IPR003591 -
Seca2g01442 1082 SMART LRR_typ_2 478 502 IPR003591 -
Seca2g01442 1082 FunFam LRR receptor-like serine/threonine-protein kinase EFR 736 846 - -
Seca2g01442 1082 Gene3D Ribonuclease Inhibitor 91 242 IPR032675 -
Seca2g01442 1082 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 93 201 - -
Seca2g01442 1082 SUPERFAMILY L domain-like 92 388 - -
Seca2g01442 1082 Gene3D Ribonuclease Inhibitor 305 696 IPR032675 -
Seca2g01442 1082 ProSitePatterns Protein kinases ATP-binding region signature. 771 794 IPR017441 GO:0005524
Seca2g01442 1082 Pfam Leucine rich repeat N-terminal domain 92 131 IPR013210 -
Seca2g01442 1082 Pfam Protein kinase domain 766 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01442 Seca-Chr2 24305999 24311472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01442 91 1081 Receptor kinase-like Gene Family AT3G47570 45.717 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca2g01442 Pkinase 4.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01442 - - gmx:100797146 1266.91