Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01392 ATGGCACCAAGCAAACCAGAAATACAAAATAATTCAGTTTCTGGGTCTGGCCAGTTTAACTATACTAATGCATCTCAGTCTGTCAGAGAACAAAGGAGATCAGAAGATGGGTTCAACTGGAGAAAATATGGACAGAAACAAGTAAAAGGAAGCAAAAATCCATGCAGTTATCACAAATGCACACACCCAAATTGCTCAATAAGGAAGAAAGTTGAGAGATCTTTGGATGGACAAATTACTGAAATAGCATGTAAGGGAAATCATAACCACCCTAAGCCCCAGTCTACTAGAAGATCTAGCTCTCAACCAATTCATCCTGCACCAACTCAGGGATTTCTAATCAATCAGTGGTGA 354 0.3955 MAPSKPEIQNNSVSGSGQFNYTNASQSVREQRRSEDGFNWRKYGQKQVKGSKNPCSYHKCTHPNCSIRKKVERSLDGQITEIACKGNHNHPKPQSTRRSSSQPIHPAPTQGFLINQW. 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01392 117 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 101 IPR044810 GO:0003700
Seca2g01392 117 SUPERFAMILY WRKY DNA-binding domain 30 93 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g01392 117 Gene3D WRKY domain 20 94 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g01392 117 MobiDBLite consensus disorder prediction 84 117 - -
Seca2g01392 117 ProSiteProfiles WRKY domain profile. 29 93 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g01392 117 MobiDBLite consensus disorder prediction 1 55 - -
Seca2g01392 117 Pfam WRKY DNA -binding domain 35 91 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g01392 117 MobiDBLite consensus disorder prediction 1 28 - -
Seca2g01392 117 MobiDBLite consensus disorder prediction 89 117 - -
Seca2g01392 117 FunFam WRKY transcription factor 23 94 - -
Seca2g01392 117 SMART WRKY_cls 34 92 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01392 Seca-Chr2 23441014 23441367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01392 29 94 WRKY Transcription Factor Family AT2G38470 78.788 1.09e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca2g01392 WRKY 1.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01392 K13424 - gmx:100776837 175.252