Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01379 ATGAATGCAATCCATAAGATTTATAAGATTTCAAAAGCACAAACACTTATAGCATTATTGAGTATTGTGCCAGGTTACTGGTTCACAATAGCATTCATTGATTACATGGGTTGTTTTGCCATCCAATTTATTGGTTTCTTTTTCATGACTGTCTTCATGTTTGCTCTGGCCATACCATATGATTATTGGACCAAGAAAGAAAATAGAATTGGGTTTGTGGCGATGTACTCACTCACCTTCTTCTTCGCCAATTTTGGTCCAAATGCCACCACATTTGTTATGCCAGCAGAGATACTCCCAGCAAAGCTAAGGTCTACTTGTCATGGAATCTCAGTTGCTGCAGGAAAGGCAGGAGCAATTGTAGGTGTACTTGGTTTCTTACATGTTGCACAAAGTAAGGACCCCCACCAAGACTGA 417 0.3981 MNAIHKIYKISKAQTLIALLSIVPGYWFTIAFIDYMGCFAIQFIGFFFMTVFMFALAIPYDYWTKKENRIGFVAMYSLTFFFANFGPNATTFVMPAEILPAKLRSTCHGISVAAGKAGAIVGVLGFLHVAQSKDPHQD. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01379 138 Gene3D MFS general substrate transporter like domains 1 137 IPR036259 -
Seca2g01379 138 SUPERFAMILY MFS general substrate transporter 16 131 IPR036259 -
Seca2g01379 138 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 14 125 - -
Seca2g01379 138 Pfam Sugar (and other) transporter 28 129 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01379 Seca-Chr2 23189443 23189859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01379 1 134 Inorganic Solute Cotransporters AT3G54700 78.358 1.69e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01379 K08176 - lja:Lj6g3v0030000.1 226.868