Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01354 ATGGCATCCACATGTGATGCTTGTGGTTACCGTAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAAGGAAAAAGGATTACTCTAAGTGTGAAAAATGTTAATGACCTGAGTCGTGATGTAATAAAGTGTAAAATTCCTGAACTTGACTTGGAGCTGGCAAGCGGTACCCTGGGAGGAATTGTTACAACTGTTGAAGGCCTTGAGAGGGTCCATGGGTTTACTTTTGGAGATAGTCTTGATGAACATAGAAGAAGCAAGTGGTTAGACTTCAAAGCAAGGCTAAACAAGCTTCTTAGCTTGGAAAAAGCTTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTCAAAGACGACAATCAATTAACATTTGAGGAATATGAGAGGTCATGGGAGCAAAATGAAGAATTAGGTCTGAATGATATGGATACCTCTTGTGCCGATGCTGCTTATGAATCAACAAATACTACTAAAATTGAGTGA 513 0.3977 MASTCDACGYRNSELKPGGRIPEKGKRITLSVKNVNDLSRDVIKCKIPELDLELASGTLGGIVTTVEGLERVHGFTFGDSLDEHRRSKWLDFKARLNKLLSLEKAWTLILDDALANSFVAPATDDLKDDNQLTFEEYERSWEQNEELGLNDMDTSCADAAYESTNTTKIE. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01354 170 Gene3D ZPR1, zinc finger domain 1 19 IPR042452 -
Seca2g01354 170 NCBIfam ZPR1 zinc finger domain 3 153 IPR004457 GO:0008270
Seca2g01354 170 PANTHER ZINC FINGER PROTEIN ZPR1 1 164 IPR040141 -
Seca2g01354 170 FunFam Zinc finger protein zpr1 20 149 - -
Seca2g01354 170 Gene3D ZPR1, A/B domain 20 149 IPR042451 -
Seca2g01354 170 Pfam ZPR1 zinc-finger domain 1 119 IPR004457 GO:0008270
Seca2g01354 170 SMART zpr1 1 121 IPR004457 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01354 Seca-Chr2 22852522 22855887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01354 1 169 C2H2 Transcription Factor Family AT5G22480 74.176 2.44e-92 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01354 K06874 - gmx:100798741 305.834