Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01310 ATGATCCTTCCAATTAGCAAAGTTTCTTTCTTCTTACTCTTTTGCCTTATTGGGATTGTCTCAGCTCAGTTATCCTCCACTTTTTATGCCAAAACTTGTCCTACTGCGCTTTCAACCATTAGAACAGAAGTGATCTCTGCTGTCAGCAAAGAGGCCCGCATGGGAGCATCTCTGCTCCGTCTTCATTTCCATGACTGTTTTGTTCAAGGGTGTGATGCATCAGTACTATTGGACGATACATCGAGTTTCACAGGTGAGAAAACTGCAGGCCCCAATGCTAATTCACTGAGAGGCTTTGATGTAATAGACACCATAAAGTCTAAACTTGAGAGCTCATGCCCTGGTGTTGTCTCTTGTGCTGACATCCTTACTGTAGCTGCAAGAGACTCTGTTGTTGCTCTTGGTGGACCTAGTTGGACAGTGCCATTGGGGAGAAGAGACTCAACCACAGCAAGTTTAAGTTCTGCTAACTCTGACTTGCCTGGTCCTGGTTCTGATCTAAGTAACCTTATCTCTGCTTTCTCCAACAAAGGTTTCTCAACCAAAGAAATGGTTGCTCTATCAGATGCACTTATTAGGATAAGAATTTTTTCAGGATCACACACAATTGGCCAAGCGAGGTGTACATTCTTCAGATCAAGGATTTACAACGAGAACAACATAGATTCTGCTTTTGCTAAATCATTGCAAGCAAATTGTCCAACCTCAGGTGGTGATAACAATTTGTCCCCTCTTGACACCACCACTCCAAACACCTTTGACAATGCTTACTACAGGAATTTGCAGAACAAAAAGGGTCTCTTTCACTCTGATCAAGTGCTTTTCAATGGAGGGTCCACAGACTCTATAGTAAATGGTTATAGCAGCAACCCTTTAAGTTTCAGAGCTGACTTTGCCAATGCAATGGTTAAAATGGGGAACCTTAGCCCTCTTACTGGGTCTAGTGGCCAGATTAGGACCAATTGTAGGAAGACCAACTGA 981 0.4302 MILPISKVSFFLLFCLIGIVSAQLSSTFYAKTCPTALSTIRTEVISAVSKEARMGASLLRLHFHDCFVQGCDASVLLDDTSSFTGEKTAGPNANSLRGFDVIDTIKSKLESSCPGVVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASLSSANSDLPGPGSDLSNLISAFSNKGFSTKEMVALSDALIRIRIFSGSHTIGQARCTFFRSRIYNENNIDSAFAKSLQANCPTSGGDNNLSPLDTTTPNTFDNAYYRNLQNKKGLFHSDQVLFNGGSTDSIVNGYSSNPLSFRADFANAMVKMGNLSPLTGSSGQIRTNCRKTN. 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01310 326 ProSiteProfiles Plant heme peroxidase family profile. 23 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 FunFam Peroxidase 27 165 - -
Seca2g01310 326 Gene3D Peroxidase, domain 2 161 305 - -
Seca2g01310 326 SUPERFAMILY Heme-dependent peroxidases 23 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Seca2g01310 326 Gene3D - 27 323 - -
Seca2g01310 326 CDD secretory_peroxidase 23 325 IPR033905 GO:0004601|GO:0042744
Seca2g01310 326 PANTHER PEROXIDASE 72-RELATED 16 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01310 326 FunFam Peroxidase 161 305 - -
Seca2g01310 326 Pfam Peroxidase 41 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01310 Seca-Chr2 21654314 21656958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01310 19 326 Peroxidase AT5G05340 64.194 1.21e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01310 K00430 - gmx:100815142 535.028