Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01309 ATGAATATCAGTCCAATCTTCAAAACTCGCTCCTTATTGTTATTCTTATGCTTTATTGGCATAGCTTCAGCTCAATTGTCCTCTGATTTTTACTCCTCAACATGTCCTAATGTGCTCTCAACCATTAAGACAGCAGTAGACTCTGCTGTGAGCAATGAAGCTCGCATGGGAGCATCCCTGCTTCGTCTCCATTTCCATGATTGCTTTGTTCAAGCAAGTCCACTCTCAGGGTGTGATGCATCAGTTCTACTAGACGACACATCAAGTTTCACAGGTGAACAATCAGCATTTCCCAATGTTAATTCCTTAAGGGGTTTTGATGTAATAGACACCATAAAGTCTCAAGTGGAAAACTTGTGTCCTGGTGTTGTCTCTTGTGCTGACATCCTTGCTGTAGCTGCAAGAGACTCTGTTGTTGCTCTTGGTGGACCTAGTTGGACAGTGCCATTGGGGAGAAGAGACTCAACCACAGCAAGTTTGAATTCTGCTAACTCTGACTTGCCTGGTCCTGGTTCTGATCTAAGTGACCTTATCTCTAATTTCTCCAACAAAGGTTTCACAACCAATGAAATGGTTGCTCTATCAGGATCTCACACAATTGGGCAAGCTAGCTGTAGAAACTTCAGAACAAGGATTTACAATGAGACCAACATAGATTCCACCTTTGCAACATCATTGCAAGCAAATTGTCCTAGCACAGGTGGTGATGGCAATTTGTCTCCAATTGACACCACCAGTCCAAACACCTTTGACAATGCTTACTTCAAGAATTTGCAGAGCCAAAAGGGTCTATTCCACTCAGATCAAGTGCTATTTAATGGAGGATCTACAGACTCTCAAGTAAATGCTTATAGCAGTGACTCTGCAAGTTTTGCAACTGACTTTGCCAATGCAATGGTTAAAATGGGGAACCTAAGCCCACTCACTGGCTCTAGTGGCCAGATTAGGACCAATTGCAGGAGGATCAACTGA 972 0.43 MNISPIFKTRSLLLFLCFIGIASAQLSSDFYSSTCPNVLSTIKTAVDSAVSNEARMGASLLRLHFHDCFVQASPLSGCDASVLLDDTSSFTGEQSAFPNVNSLRGFDVIDTIKSQVENLCPGVVSCADILAVAARDSVVALGGPSWTVPLGRRDSTTASLNSANSDLPGPGSDLSDLISNFSNKGFTTNEMVALSGSHTIGQASCRNFRTRIYNETNIDSTFATSLQANCPSTGGDGNLSPIDTTSPNTFDNAYFKNLQSQKGLFHSDQVLFNGGSTDSQVNAYSSDSASFATDFANAMVKMGNLSPLTGSSGQIRTNCRRIN. 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01309 323 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601|GO:0042744
Seca2g01309 323 PANTHER PEROXIDASE 72-RELATED 21 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 Gene3D - 29 320 - -
Seca2g01309 323 FunFam Peroxidase 168 302 - -
Seca2g01309 323 FunFam Peroxidase 29 174 - -
Seca2g01309 323 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Seca2g01309 323 ProSiteProfiles Plant heme peroxidase family profile. 25 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 Pfam Peroxidase 43 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Seca2g01309 323 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 Gene3D Peroxidase, domain 2 168 302 - -
Seca2g01309 323 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01309 323 SUPERFAMILY Heme-dependent peroxidases 25 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01309 Seca-Chr2 21638863 21641237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01309 21 323 Peroxidase AT5G05340 66.230 1.05e-146 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01309 K00430 - gmx:100815142 506.138