Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01308 ATGATCAGTTTGTGGCTGTTAGCATGCCTTTTTGGCTTAGCTTCAGCTCAATTAAACCCCAATTTTTATTTATTATCATGTCCCTTGGCTGTTTCTACCATTAAGACACAAGTCACCCTTGCTGTGCTAGCAGAGCCTCGCATGGGTGCATCCTTACTCCGTTTACATTTCCATGATTGCTTTGTCCAAGCAAGTCTCCTCTCTTCATCTTCATCTTTTATATATATATATATATATATGTTCCTCATACTTTTTCTTATTTTTAAAATTTGCTTACATTATATAATATATGGGTGTGATGCATCAGTGTTGTTAAACGACACAGATACATTCACAGGTGAGAAGACAGCATTTCCAAACGTGAATTCATTGAGGGGTTTCGAAGTAATAGACAACATTAAATCCCTTATAGAAGCCTTATGCCCTGGTGTTGTCTCTTGCGCTGACATCTTAGCTGTTGCTGCACGAGACTCTGTTGTTGCTCTGGGTGGACCTAGTTGGACAGTGGGTTTAGGGAGAAGAGACTCAACGACTGCAAGTTTGGCCGGTGCTAATTCTGACTTGCCAGCTCCTTTCCTCAATCTTGATGGCCTTATCACTGCTTTTGCCAACAAAGGCTTCACTGCCGCTGAGATGGTTGCTTTGTCAGGTGCTCACACAATAGGCAAAGCGAGGTGTTTAACCTATAGACAAAGGATTTACAACGACACCAACATAGATGCCTCATATGCGGCATCACTACAAGCAATTTGTCCCTTTACAGGTGGTGATGACAATTTAGCCCCTCTAGACACCACCACTCCGAACCTTTTCGACAATAAATACTACAGCAATTTGTTGAGTTTGAAAGGTCTCTTGCACTCAGACCAAGAGCTCTTCAATGGAGGTTCCACAGATGCCCAAGTGCAAGATTACGTTTCCCACCCATTAAACTTCAGAGCAGATTTTGCTAATGCAATGGTTAAGATGGGCAACCTTAGCCCACTAACCGGCCAGAATGGTCAGATAAGAACCAAATGCTACCAGGTCAATCAAGTCAACAATAATAAATAA 1053 0.4198 MISLWLLACLFGLASAQLNPNFYLLSCPLAVSTIKTQVTLAVLAEPRMGASLLRLHFHDCFVQASLLSSSSSFIYIYIYMFLILFLIFKICLHYIIYGCDASVLLNDTDTFTGEKTAFPNVNSLRGFEVIDNIKSLIEALCPGVVSCADILAVAARDSVVALGGPSWTVGLGRRDSTTASLAGANSDLPAPFLNLDGLITAFANKGFTAAEMVALSGAHTIGKARCLTYRQRIYNDTNIDASYAASLQAICPFTGGDDNLAPLDTTTPNLFDNKYYSNLLSLKGLLHSDQELFNGGSTDAQVQDYVSHPLNFRADFANAMVKMGNLSPLTGQNGQIRTKCYQVNQVNNNK. 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01308 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 211 221 IPR019793 -
Seca2g01308 350 PRINTS Plant peroxidase signature 210 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 PRINTS Plant peroxidase signature 51 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 PRINTS Plant peroxidase signature 27 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 PANTHER PEROXIDASE 72-RELATED 14 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 ProSitePatterns Peroxidases active site signature. 49 60 IPR019794 GO:0004601
Seca2g01308 350 Pfam Peroxidase 36 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 Gene3D - 21 64 - -
Seca2g01308 350 CDD secretory_peroxidase 17 340 IPR033905 GO:0004601|GO:0042744
Seca2g01308 350 Gene3D Peroxidase, domain 2 189 323 - -
Seca2g01308 350 Gene3D - 95 340 - -
Seca2g01308 350 ProSiteProfiles Plant heme peroxidase family profile. 17 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 SUPERFAMILY Heme-dependent peroxidases 17 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 PRINTS Haem peroxidase superfamily signature 211 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 PRINTS Haem peroxidase superfamily signature 49 63 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca2g01308 350 FunFam Peroxidase 189 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01308 Seca-Chr2 21560224 21562720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01308 13 344 Peroxidase AT5G05340 54.192 3.60e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01308 K00430 - gmx:100815142 431.795