Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01295 ATGGGCAATCACAGGTTCAAATTATCAGATATGATGCCTAATGCTTGGTTTTACAAGCTCAGAGACATGGGTAGAGCAAGAAAGCAAACCCCAACACAACCCAGAAACAAAAAACAATCTTTACCAGCTTCAACCACACATTCATCAAAACCAAAGCAACCCCACCAATGCAATCCCAGAAAATCTTACTACTTTACAAGAGAGCTTAACCCAAGCAATAAAATCCACACTTCACCAGCAAATAACCAAAATTTCCCTGAACCACCAAGAAAATCATCCAAACAAAGACCCAAAAGAAGAACTTCAAGGACTTCTTCTTCTTCACCTAAGCTTGTAACAACCCCTTCTGTTTCTGCTAATTCTAGCTACCACAACACACTTGAATCTGATTCCCCACCTGAAAACTCCTCATCCCCACTTGATAGCTCTGCAGAATCAGAATTCCCTGACCCAGAAATCAGAACAGACCGTGTTCTTCCCACTGATGAAACTGCTTCATGTGCCTGCAAGCTACACACCAACAACACCAATGACATCATCATTGATGTAGACAACAATTCCATAGCCAGAAAAGATGATAAGCTAGAAGGGTATGAATATGATTCCTTCTCAGACCTCATGCTTCCACCAATTGTGACCAAACCAACAAAGTTCAATGACTTACTAAACGATGCAAAGAAGAAAGAAACAAAACCCAGAAGCAGAATGGCTTCACATGAAGAACAAATCATGAAAGGGTCACTAAAAGTTAAAATTGTGAAGGAAGAACAGAGGAACAACCATGTTGGTAGAAGATTCTCTGTGAGTTCACCAGGTGTGAGGCTTAGGATAAATTCACCAAGAATTGCTAGCCGGAAAGTTCAGTCACATGGCCGGAAAAGTGTGTCATCCTCCGGCGCCGGCGGCACCGGATTCAGGAGGAGTCTCTCAGATAGCTTTGCAATTGTGAAGTCTTCATTCAATCCACAGAGAGATTTCAGAGAATCAATGGTGGAGATGATTGTGCAACATAACATAAGGACATCAAAGGATTTGGAAGATCTTCTTGCTTGCTATCTTTCTCTGAATTCAGATGAGTATCATGATCTCATTATCAAAGTGTTCAAGCAAATTTGGTTTGATTTGACTGATAATCAGTAG 1140 0.4096 MGNHRFKLSDMMPNAWFYKLRDMGRARKQTPTQPRNKKQSLPASTTHSSKPKQPHQCNPRKSYYFTRELNPSNKIHTSPANNQNFPEPPRKSSKQRPKRRTSRTSSSSPKLVTTPSVSANSSYHNTLESDSPPENSSSPLDSSAESEFPDPEIRTDRVLPTDETASCACKLHTNNTNDIIIDVDNNSIARKDDKLEGYEYDSFSDLMLPPIVTKPTKFNDLLNDAKKKETKPRSRMASHEEQIMKGSLKVKIVKEEQRNNHVGRRFSVSSPGVRLRINSPRIASRKVQSHGRKSVSSSGAGGTGFRRSLSDSFAIVKSSFNPQRDFRESMVEMIVQHNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDNQ. 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01295 379 MobiDBLite consensus disorder prediction 104 144 - -
Seca2g01295 379 MobiDBLite consensus disorder prediction 282 303 - -
Seca2g01295 379 Pfam DNA-binding domain 1 40 IPR025830 GO:0003677
Seca2g01295 379 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 55 377 IPR038933 GO:0045892
Seca2g01295 379 MobiDBLite consensus disorder prediction 71 160 - -
Seca2g01295 379 MobiDBLite consensus disorder prediction 29 59 - -
Seca2g01295 379 MobiDBLite consensus disorder prediction 71 90 - -
Seca2g01295 379 MobiDBLite consensus disorder prediction 26 59 - -
Seca2g01295 379 Pfam Transcriptional repressor, ovate 319 375 IPR006458 -
Seca2g01295 379 NCBIfam uncharacterized plant-specific domain TIGR01568 314 376 IPR006458 -
Seca2g01295 379 MobiDBLite consensus disorder prediction 280 303 - -
Seca2g01295 379 ProSiteProfiles OVATE domain profile. 315 374 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01295 Seca-Chr2 21122542 21123681 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca2g01295 Ovate 8.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01295 - - aprc:113863721 484.952