Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01292 ATGAAGACTGTGTATAGGGCATTTGATGAGGTTCTGGGGATTGAAGTGGCTTGGAACCAAGTCCATCTAGGTGATGTCTTTCATTCACCAGATCAACTTCAACGCCTATATTCAGAGGTTCATCTCCTTAAGCACCTTGACCATGAATCCATGATGATCTTCTATGGTTCTTGGATTGATGTCAATTGCAGAACCTTCAACTTCATCACTGAATTGTTCACCTCAGGCACCCTTAGAGAGTATAGGCAAAAGTATAGGAGAGTAGACATGAGGGCAGTGAAAAATTGGGCTTGCCAGATTCTAAGGGGTTTGGAGTATTTACACAGCCATAATCCTCCTGTAATACATAGAGACCTCAAGTGTGATAATATCTTTGTCAATGGCCATATGGGGCAGGTCAAGATTGGTGACTTAGGCCTGGCAGCTATACTTCGTAGCTCTCAACATGCCCATAGTGTCATAGGTACACCAGAGTTCATGGCACCAGAATTGTATGAAGAGAAATATAATGAACTGGTAGATGTTTACTCATTTGGGATGTGTATGATAGAGATCCTTACTCTTGAGTTCCCATACAGTGAATGCTCCAACCCAGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTACCAGATGCATTTTACAGAATCCAAGATTTGGAAGCCCAGAGATTTGTGAAAAGATGTTTGTCAAATGTCTCAAAGAGACCATCAGCAAAGGAGCTCTTGTTGGATCCATTTTTAGCCATGGAGCAACTTGAATTGTCATTGCCAAGCACACAATTATCTACAAATCAAACTCTTGAGCTTCATTCAACTGCAGCAATTGCCAATAAGCATCTTTTAATAGGTGATCTGACAAAGAGCACAGATATGACAATAACTGGATCAATAAATGAAGATAATAACACAATTTTCCTTAAAGTGCGGATATCTGATGAAATGGGGCATACAAGACATGTATTCTTTCCATTTGACACTAAAAAAGACACTGCTTTTGAGGTAGCAATGGAGATGGTACAAGAACTTGAAATTAGCCACTTGGAACCATCAGAGATTGCTGCAATGATTGATCATGAGATATCAGCTTTAGTTCCAACTTGGAGGGATAAGTGTAAGTGCAAGCATCAACGACAGCACAGCTTCAACTATGAAGAAGATGAGGATAGCAATAATCACCATCCTTTCTTCTTCTCATCTTCTCCATCTTCCCCTCATGGTTCTCTGATTCCCAAGTCTGGTTCCTCCAGCTCCAAGAACCACTTCCATGGGAACCATTGCATAATTACTCAAGAATGGCCTCAAGAGAAGGGGGAACAGGAATAA 1326 0.4087 MKTVYRAFDEVLGIEVAWNQVHLGDVFHSPDQLQRLYSEVHLLKHLDHESMMIFYGSWIDVNCRTFNFITELFTSGTLREYRQKYRRVDMRAVKNWACQILRGLEYLHSHNPPVIHRDLKCDNIFVNGHMGQVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDVYSFGMCMIEILTLEFPYSECSNPAQIYKKVTSGKLPDAFYRIQDLEAQRFVKRCLSNVSKRPSAKELLLDPFLAMEQLELSLPSTQLSTNQTLELHSTAAIANKHLLIGDLTKSTDMTITGSINEDNNTIFLKVRISDEMGHTRHVFFPFDTKKDTAFEVAMEMVQELEISHLEPSEIAAMIDHEISALVPTWRDKCKCKHQRQHSFNYEEDEDSNNHHPFFFSSSPSSPHGSLIPKSGSSSSKNHFHGNHCIITQEWPQEKGEQE. 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01292 441 CDD STKc_WNK 2 248 - -
Seca2g01292 441 MobiDBLite consensus disorder prediction 394 421 - -
Seca2g01292 441 FunFam Probable serine/threonine-protein kinase WNK1 1 71 - -
Seca2g01292 441 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
Seca2g01292 441 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01292 441 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 396 - -
Seca2g01292 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Seca2g01292 441 Pfam Protein kinase domain 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01292 441 FunFam probable serine/threonine-protein kinase WNK9 73 253 - -
Seca2g01292 441 MobiDBLite consensus disorder prediction 385 421 - -
Seca2g01292 441 Gene3D Transferase(Phosphotransferase) domain 1 73 254 - -
Seca2g01292 441 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01292 441 SUPERFAMILY Protein kinase-like (PK-like) 3 249 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01292 Seca-Chr2 21060021 21064540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01292 1 392 MAP Kinase Kinase Kinase AT3G51630 65.140 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Seca2g01292 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01292 K08867 - gmx:100272206 699.123