Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01285 ATGAGTTTCAGAGACAGGAACATAGGAGGAGAAGAGAGGGAATGTGAAGAATCGGTGTTAGGAAGCACTGAATCCAAATCAGTGAGGCAAAATGGGTCGTTAACAACCACACAGCTAACAATTGATGAGAGTCTTCTGGTTGACCCCAAACTGCTCTTTATTGGCTCCAAGATTGGTGAGGGAGCTCATGGGAAAGTTTATGAAGGAAGGTATGGAGATAGAATTGTTGCAATCAAAGTGCTGAATCGCGGGAGCACTTCAGAAGAAAGAGCTGCCCTTGAAAATCGTTTTGCTCGGGAAGTTAACATGATGTCTCGTGTCCACCATGACAATCTTGTTAAGTTTATTGGAGCTTGTAAGGAACCTCTTATGGTGATAGTTACAGAGCTATTGCCAGGGATGTCACTAAGGAAATATTTGATGAATGTACGTCCTAAACTACTAGACCTTCACGTGGCTATAAACTTTGCCCTTGATATTGCTCGAGCCATGGATTGGCTGCATGCCAATGGGATCATTCATAGAGATCTGAAACCCGACAATCTGTTGCTTACGGCAAATCAGAAGTCTGTTAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTTACTGAAATGATGACCGCAGAAACAGGAACTTACCGATGGATGGCACCAGAGCAGTTGTACAGTACTGTAACATTGCGCCAGGGAGAGAAAAAACACTATAACAACAAGGTTGATGTGTATAGCTTTGGAATTGTTTTGTGGGAGCTACTAACAAACCGCATGCCTTTTGAAGGGATGTCCAATTTACAAGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTAGTCTTCCAGATGATATATCCCCTGATCTTGCTTATGTCATACAATCATGCTGGGTTGAAGATCCTAACTTGAGACCAAGCTTTAGTCAGATCATCCGGATGCTCAACGCGTTTCTCTTCACACTCTCGCCACCATCTCCTCCTTTGCCAGAACCTGACAGTGATCCTGAGGCAGTAGCAACAACAAGTAATGGTACAATCACTGAGTGTTCTGCCCGAAACAAAGGAAAGTTTGCTTTTCTTCGCCAGTTGTTTTCTTCCAAAAGGATAAAAAACTAA 1116 0.431 MSFRDRNIGGEERECEESVLGSTESKSVRQNGSLTTTQLTIDESLLVDPKLLFIGSKIGEGAHGKVYEGRYGDRIVAIKVLNRGSTSEERAALENRFAREVNMMSRVHHDNLVKFIGACKEPLMVIVTELLPGMSLRKYLMNVRPKLLDLHVAINFALDIARAMDWLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPEQLYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPSLPDDISPDLAYVIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPPSPPLPEPDSDPEAVATTSNGTITECSARNKGKFAFLRQLFSSKRIKN. 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01285 371 MobiDBLite consensus disorder prediction 1 20 - -
Seca2g01285 371 Pfam Protein tyrosine and serine/threonine kinase 54 314 IPR001245 GO:0004672|GO:0006468
Seca2g01285 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Seca2g01285 371 FunFam Kinase suppressor of Ras 1 41 131 - -
Seca2g01285 371 ProSiteProfiles Protein kinase domain profile. 52 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01285 371 ProSitePatterns Protein kinases ATP-binding region signature. 58 79 IPR017441 GO:0005524
Seca2g01285 371 Gene3D Phosphorylase Kinase; domain 1 41 131 - -
Seca2g01285 371 SUPERFAMILY Protein kinase-like (PK-like) 50 337 IPR011009 -
Seca2g01285 371 MobiDBLite consensus disorder prediction 1 31 - -
Seca2g01285 371 Gene3D Transferase(Phosphotransferase) domain 1 134 323 - -
Seca2g01285 371 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 52 315 - -
Seca2g01285 371 CDD STKc_MAP3K-like 58 314 - -
Seca2g01285 371 SMART serkin_6 52 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g01285 371 PRINTS Tyrosine kinase catalytic domain signature 166 184 IPR001245 GO:0004672|GO:0006468
Seca2g01285 371 PRINTS Tyrosine kinase catalytic domain signature 128 141 IPR001245 GO:0004672|GO:0006468
Seca2g01285 371 PRINTS Tyrosine kinase catalytic domain signature 241 263 IPR001245 GO:0004672|GO:0006468
Seca2g01285 371 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01285 Seca-Chr2 20881080 20885140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01285 40 368 MAP Kinase Kinase Kinase AT5G01850 73.729 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Seca2g01285 PK_Tyr_Ser-Thr 1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01285 - - cave:132162584 595.504