Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01263 ATGGAGAATCTAACTAGGAAGGCAATTGAGGAGCTTGTGAAAGGGCGTGAGTGTGCAAACCAACTTAGAAGTGTAATCAATGAAGGAGGCAATGATGGGTCAGTTATAACAACCCCATTTGCTGAACAACTTGTGAGGGAAGTGCTCATGTCCTTTACCAATTCCCTCTTGTTATTGAACAATCCCACTTCTGAATCAGTCTCTGATGTGCAAATCAGAGACTCTTCCAAGTCTGAGGACTCTCAAGAGAGTAATTGCAAGAGTTCCAGCATCAAGGAAAGAAGAGGGTGTTACAAGAGAAGCTGCAATTCTTGTTTTTGCAGGAGAACTTCACAAACATGGGAGAAAGAATCTGAAGCTCCAATTGAAGATGGACATCAATGGAGAAAGTATGGCCAAAAGACAATCTTGAATACCCAATACCCAAGGAACTATTACAGGTGCACTCACAAATATGATCAAGATTGCAAGGCAACAAAACAGGTTCAGAGAGTTCAAGAGGATCCACCCCTTTTTAAGACCACATACTATGGACACCACACTTGTAGAACCTTGCAAAACACTGAGATGATAGTGGATTCTGTTTCTCCTTCTGATGACTCTACCATGTTCCTTAGCTTTGACAACTCCCTCCCAACACCAGCCAAACAAGATTGCCCCTTTTTCTCATCTTCTTTCCCATCATCATCTTCATCAGTCAAAAGGGAGTGCAAGGAAGAGGAGATTCATCCCTCATCTTCCTCCAATGATTACTTACTCTCTTCTGAACTCACTTTTGATGATTCCACAAGACATGTCACTCTATCATCAACCCTTGACTCAGATCACATAGGGGTCATCCCCGATGTGTTGTATGACTCTGCTGAGTTTGATGATGTCTTTCAGCCCTTTCTTGAACTTAGATGA 906 0.4227 MENLTRKAIEELVKGRECANQLRSVINEGGNDGSVITTPFAEQLVREVLMSFTNSLLLLNNPTSESVSDVQIRDSSKSEDSQESNCKSSSIKERRGCYKRSCNSCFCRRTSQTWEKESEAPIEDGHQWRKYGQKTILNTQYPRNYYRCTHKYDQDCKATKQVQRVQEDPPLFKTTYYGHHTCRTLQNTEMIVDSVSPSDDSTMFLSFDNSLPTPAKQDCPFFSSSFPSSSSSVKRECKEEEIHPSSSSNDYLLSSELTFDDSTRHVTLSSTLDSDHIGVIPDVLYDSAEFDDVFQPFLELR. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01263 301 Gene3D WRKY domain 104 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g01263 301 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g01263 301 Pfam WRKY DNA -binding domain 123 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g01263 301 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g01263 301 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 217 IPR044810 GO:0003700
Seca2g01263 301 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01263 Seca-Chr2 20452126 20453830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01263 7 265 WRKY Transcription Factor Family AT3G56400 34.532 8.77e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca2g01263 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01263 - - aprc:113861812 391.734