Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca2g01227 | ATGCTAACCCTCAATCTCAATGCTGTTTCTTCTTCGTTTTCTTCGTTCTCAGTTCTTCCCTTCCCCTCCAATTATCCACTGTCTACTCAAACTCACTCATCAGTTCCTTCCAATCTTAATTACTCCTTTGCTACTACTGGAACCAGAAAGTTCAAGACTTTTCAGCTCAAGGCTGGATTCTGGGAATCAATTAAATCTGGGTTGACAAAGAGTAACACCACGCAGGTTATCGATCCACAGTCCACAGATGAAGAAGATGAAGAACCTCTGCCTCAAGAGTTTGTCCTTGTTGAAAAGACTGAACTTGATGGAACAATTGAGCAAATAATATTCTCTTCTGGTGGAGATATTGATGTTTATGATCTTCAAGCTCTCTGTGACAAGGTAGGGTGGCCGCGTAGGCCTTTGTCAAAATTAGCTGCTGCTTTGAAAAATAGCTATATAGTGGCCTCACTGCATTCTGTAAGAAAGTCACCTGGGTCAGAGGGGAATGAACAAAAGAAATTAATTGGCATGGCCCGTGCTACGTCAGACCATGCCTTCAATGCTACAATTTGGGATGTGCTTGTTGACCCTGGCTACCAGGGCCAAGGTCTTGGCAAAGCTCTTGTAGAGAAACTGATTCGAACTCTTTTGCAAAGGGACATTGGTAATATAACTTTGTTTGCAGATAGTAAAGGTATAACAATATTGACAACATTTATGCACTTGATGTTCACTTTTTCAATTACATAA | 735 | 0.4109 | MLTLNLNAVSSSFSSFSVLPFPSNYPLSTQTHSSVPSNLNYSFATTGTRKFKTFQLKAGFWESIKSGLTKSNTTQVIDPQSTDEEDEEPLPQEFVLVEKTELDGTIEQIIFSSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSVRKSPGSEGNEQKKLIGMARATSDHAFNATIWDVLVDPGYQGQGLGKALVEKLIRTLLQRDIGNITLFADSKGITILTTFMHLMFTFSIT. | 245 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca2g01227 | 244 | FunFam | Putative acetyltransferase NSI | 113 | 240 | - | - | |
Seca2g01227 | 244 | CDD | NAT_SF | 165 | 221 | - | - | |
Seca2g01227 | 244 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 118 | 226 | IPR016181 | - | |
Seca2g01227 | 244 | Gene3D | - | 113 | 231 | - | - | |
Seca2g01227 | 244 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 109 | 244 | IPR000182 | GO:0016747 | |
Seca2g01227 | 244 | PANTHER | ACYL-COA N-ACYLTRANSFERASE | 28 | 227 | IPR045039 | GO:0008080 | |
Seca2g01227 | 244 | Pfam | Acetyltransferase (GNAT) family | 119 | 221 | IPR000182 | GO:0016747 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca2g01227 | Seca-Chr2 | 19936404 | 19940949 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | GNAT | Seca2g01227 | Acetyltransf_1 | 5.2e-12 | CL0257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca2g01227 | K22450 | - | gmx:100799333 | 380.178 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca2g01227 | 2 | 19936404 | 19940949 | Seca2g01227 | 2 | 19936404 | 19940949 | ECH |