Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01227 ATGCTAACCCTCAATCTCAATGCTGTTTCTTCTTCGTTTTCTTCGTTCTCAGTTCTTCCCTTCCCCTCCAATTATCCACTGTCTACTCAAACTCACTCATCAGTTCCTTCCAATCTTAATTACTCCTTTGCTACTACTGGAACCAGAAAGTTCAAGACTTTTCAGCTCAAGGCTGGATTCTGGGAATCAATTAAATCTGGGTTGACAAAGAGTAACACCACGCAGGTTATCGATCCACAGTCCACAGATGAAGAAGATGAAGAACCTCTGCCTCAAGAGTTTGTCCTTGTTGAAAAGACTGAACTTGATGGAACAATTGAGCAAATAATATTCTCTTCTGGTGGAGATATTGATGTTTATGATCTTCAAGCTCTCTGTGACAAGGTAGGGTGGCCGCGTAGGCCTTTGTCAAAATTAGCTGCTGCTTTGAAAAATAGCTATATAGTGGCCTCACTGCATTCTGTAAGAAAGTCACCTGGGTCAGAGGGGAATGAACAAAAGAAATTAATTGGCATGGCCCGTGCTACGTCAGACCATGCCTTCAATGCTACAATTTGGGATGTGCTTGTTGACCCTGGCTACCAGGGCCAAGGTCTTGGCAAAGCTCTTGTAGAGAAACTGATTCGAACTCTTTTGCAAAGGGACATTGGTAATATAACTTTGTTTGCAGATAGTAAAGGTATAACAATATTGACAACATTTATGCACTTGATGTTCACTTTTTCAATTACATAA 735 0.4109 MLTLNLNAVSSSFSSFSVLPFPSNYPLSTQTHSSVPSNLNYSFATTGTRKFKTFQLKAGFWESIKSGLTKSNTTQVIDPQSTDEEDEEPLPQEFVLVEKTELDGTIEQIIFSSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSVRKSPGSEGNEQKKLIGMARATSDHAFNATIWDVLVDPGYQGQGLGKALVEKLIRTLLQRDIGNITLFADSKGITILTTFMHLMFTFSIT. 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01227 244 FunFam Putative acetyltransferase NSI 113 240 - -
Seca2g01227 244 CDD NAT_SF 165 221 - -
Seca2g01227 244 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 118 226 IPR016181 -
Seca2g01227 244 Gene3D - 113 231 - -
Seca2g01227 244 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 109 244 IPR000182 GO:0016747
Seca2g01227 244 PANTHER ACYL-COA N-ACYLTRANSFERASE 28 227 IPR045039 GO:0008080
Seca2g01227 244 Pfam Acetyltransferase (GNAT) family 119 221 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01227 Seca-Chr2 19936404 19940949 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca2g01227 Acetyltransf_1 5.2e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01227 K22450 - gmx:100799333 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01227 2 19936404 19940949 Seca2g01227 2 19936404 19940949 ECH