Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01215 ATGGAAGGGAGTGCGGACCTGTTCAGAGGTTCTCCTGTAGCAGGAGCATCGTCATCGTCAACGTCGTCGTTATCGTCTTCTTCTTCTTCTTCTCCGAATTCGAGAAGATACGGTTTCCTATCGGCGTCTAATATCATTCAGGCGCCGTTATCGGTGCTTCTAGAATATTCTGGTATTCTTCCGGCGAGGTCCAATCAGCACCAACCTAGCCCTGACGCAGTCTCCAACGACGGCGAGGTTTCGATAAGGATCATCGGTTCTGCGGAACACGATCATCATCACAGGGAAGAAGAGTCTTCTCCTGGTGGTGGTTTGGTGGTGGGGAATGATGCTGCTACGATGGCCAATTCCCCTACGCAGGGTGATGCAGGTGGCGTTTCAAGGACGGGAAATGGAAATGGTGACGCAGAAGCTGGTGGTGGTGACGGAGCTGGGCCCAATGGGAGGGATTCTTCTTACCAGAGATATGATATTCAGCATGCTGCTAGGTGGATTGAGCAGGTCTTGCCCTTTTCTTTGCTACTCTTGGTGGTCTTCATCCGGCAGCATTTGCAAGGGTTTTTTGTTACAATTTGGATTGCTGCTGTCCTTTTCAAATCAAATGACATTCTGCGGAAACAAACGGCCCTGAAGGGAGAGAGGAAGATACCTGTTCTAATTGGGATTGCTGTTGCTTTCACACTTCACGTGGTTGGTGTTTATTGGTGGTATCAGAATGATGATCTAATGTATCCATTGGTCATGCTTCCTCCCAAAGATATACCACCTTTCTGGCATGCTATTTTCATCATCATGGTGAATGATACTTTGGTTCGCCAGGCTGCAATGGTTTTCAAGTGTATATTGTTAATATATTACAAGAACAGCAGAGGCCGAAATTATCGTAAGCAGGGCCAAATGCTGACTCTAGTTGAATATCTGCTTCTGCTTTACCGAGCCTTGTTGCCAACACCAGTTTGGTATCGTTTCTTCCTGAACAAAGAATATGGAAGCCTCTTTTCATCACTGATGACAGGATTGTATCTAACATTTAAACTCACATCTGTTGTTGAAAAGGTGCAATCATTCTTTGCTGCAGTGAAGGCATTGTCACGCAAAGAAGTGCATTATGGGGCTTATGCTACATCAGAGCAGGTACTGTGGATGCCTGCTTTTGATCATTGA 1164 0.4622 MEGSADLFRGSPVAGASSSSTSSLSSSSSSSPNSRRYGFLSASNIIQAPLSVLLEYSGILPARSNQHQPSPDAVSNDGEVSIRIIGSAEHDHHHREEESSPGGGLVVGNDAATMANSPTQGDAGGVSRTGNGNGDAEAGGGDGAGPNGRDSSYQRYDIQHAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGERKIPVLIGIAVAFTLHVVGVYWWYQNDDLMYPLVMLPPKDIPPFWHAIFIIMVNDTLVRQAAMVFKCILLIYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEVHYGAYATSEQVLWMPAFDH. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01215 387 MobiDBLite consensus disorder prediction 1 37 - -
Seca2g01215 387 MobiDBLite consensus disorder prediction 112 127 - -
Seca2g01215 387 MobiDBLite consensus disorder prediction 13 37 - -
Seca2g01215 387 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 26 379 IPR044235 GO:0061630|GO:1904294
Seca2g01215 387 MobiDBLite consensus disorder prediction 89 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01215 Seca-Chr2 19638669 19644894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01215 3 379 C3H Transcription Factor Family AT5G01960 66.062 1.23e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01215 - K22379 gmx:100818546 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01215 2 19638669 19644894 Seca2g01215 2 19638669 19644894 ECH