Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01210 ATGGAAATTCAATACCATTGGCAGAGTTCAGAGAGATTGTGTTGGTCAGTGGTGTTAATAGTGCTATGCAGCCTCATAATATTATTGTGTGAGAAGTTGTGGTTGAAACCTCAAAGGATCCGATTGGTGCTTCAGAAACAAGGCATCAATGGACCAAAGCCTTCCTTCCCCTTTGGGAACATTTCTGAGATGCAACAGATCCATCACCAACCTTCTCTCTCTCTTGATGCCTTAGACCAATGGGTGTATTCCATCTTCCCATACTTCCATACATGGAAGCAACGCTATGGTTCAATCTACATGTACTCCACCGGAATGAAGCAACATCTATATGTGGGAAAGCCTGAATTAATAAAAGAGTTGAACCTACATAGGTCCTTGAATCTAGGAAGACCTTCATATTTAACAAAATTATTGAAGCCAATGTTGGGTCTTGGCATCCTTAGAGTCAATGGACTACAATGGGCCTTCCAAAGGAATCTTATTGCCCCTGAGTTTTTCCTTACCAAAATTAAGAGTATGGTGGATTTTATGGAAGAATCTACCTTGGAAATTATTAGAACATGGGAGAGAAGAATTACAGAAAGTGAAGGAGGGATTACAGAGATAGAGATTGATGTCGATATGAAGGTTCTTACAGGGGATGTCATTTCGAAAGCTTGTTTTAGCAGCTCTTATGCACAAGGCAACCAAATATTTGCAAAATTGGCCACTATGCAAGATGCACTATCAAGGCCTAGCATTCTATTTGGATTTTTAAACCTAAGTTTTCTTCCCACCAAGGAAAACAAAGAGATACAAAAGTTGGAGAAAGAGGTGGACATGCTGATACTACAAATCATCAATGATCGTGAAGTACAAAACCAAAAGAATAACATACAAAAGGATTTATTACAAACATTACTAGAAGGTGTTGCAAGTGATACCACATTAAGTAGTAGTGGAAAGGGTATTTTCAACATGAAGAGAATGATTATCGACATATGCAAAAATATCTACTTTGCAGGCTTTGAGAGCACTGCTCTTGCAGTTACTTGGACATTGCTGCTACTTGCTCTACATCCTGATTGGCAACAACGTGTTAGATCTGAGATTGTGGAGATTTATGATAACATATTGCCTCATTCATTTCATGACATGGGCAAACTTCAAAAGTTAAAAACACTAACAATGGTGATTCAAGAGAGTCTACGTCTTTATGGGCCTGCGGTTACAACTTCAAGGGAAGTTTTGACTGAGATGAAATTGGGGGAACTTGTGCTGCCTAAAGGCATAAACATGTGGTTATTCTTCCCTGCATTGCACCGTGATCCTGATAATTGGGGACCAAATGCTAGTGAGTTTAAGCCAGAAAGGTTTGTTGATGGTGTTTCTGCAGCCTGTAAGTATCCCCAAGCTTATGTACCATTTGGCCTTGGGAGTCGACTTTGCTTAGGCCAAAACTTTGCTATGACTGAAATTAAGGTCATACTTTGTCTTCTTCTATCTAACTTCTCCTTTTCCCTTTCACCAAATTATCGCCATTGCCCTGTGTATAAAATGTTGTTAATGCCAAAATATGGTTTAAAGCTTCTTGTTAGCAAGGTTCTTTAG 1593 0.3917 MEIQYHWQSSERLCWSVVLIVLCSLIILLCEKLWLKPQRIRLVLQKQGINGPKPSFPFGNISEMQQIHHQPSLSLDALDQWVYSIFPYFHTWKQRYGSIYMYSTGMKQHLYVGKPELIKELNLHRSLNLGRPSYLTKLLKPMLGLGILRVNGLQWAFQRNLIAPEFFLTKIKSMVDFMEESTLEIIRTWERRITESEGGITEIEIDVDMKVLTGDVISKACFSSSYAQGNQIFAKLATMQDALSRPSILFGFLNLSFLPTKENKEIQKLEKEVDMLILQIINDREVQNQKNNIQKDLLQTLLEGVASDTTLSSSGKGIFNMKRMIIDICKNIYFAGFESTALAVTWTLLLLALHPDWQQRVRSEIVEIYDNILPHSFHDMGKLQKLKTLTMVIQESLRLYGPAVTTSREVLTEMKLGELVLPKGINMWLFFPALHRDPDNWGPNASEFKPERFVDGVSAACKYPQAYVPFGLGSRLCLGQNFAMTEIKVILCLLLSNFSFSLSPNYRHCPVYKMLLMPKYGLKLLVSKVL. 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01210 530 SUPERFAMILY Cytochrome P450 80 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 Pfam Cytochrome P450 86 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Seca2g01210 530 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 Gene3D Cytochrome P450 36 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01210 530 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01210 Seca-Chr2 19579996 19585797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01210 117 526 Cytochrome P450 AT5G24900 44.444 2.03e-128 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01210 - - gmx:100801472 749.199