Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01205 ATGGCAGAGGGTTTCCTTGAACATTCTCAATGCAAAAAAGCAATGGAGGAGGTAGGTGATGACTTCTTTGATGAATTGTTATCCAGATCCTTGATTCAACACTCAAATGATGGTGCTAATGAAGAAAAGTTTGTTATGCATGACCTTGTGAATGATTTAGCTACATTTGTATCTGGAAAAAGTTGTTGTAGGCTTGAATGTGATAAAATCTCTGAAAGTGTTCGCCATTTGTCATATAACCAAGAAAGATATGACATTTCCAAGAAGTTTGAGATTTTCTACAAATTCAAATGCTTACGAACCTTCCTACCCATTTTCACACCTTGGAGGAGAGCAAATTTGTCTAGAAAAGTGGTAGATGATTTGATACCGTCACTCAAAATGTTGCGAGTATTATCATTATCATGGTATACAAACATCACATTGCTACCCGATTCATTTGGCAATTTGGTGCAGTTGCGGTATCTAGACCTCTCCCACACTGAACTCAAAAGCTTGCCTGATACAATATGTAATCTTTTCAATCTGCAGACCTTGATTTTATTATATTGCGAGAGTCTCACTGAATTGCCAGCACATGTTGAAAAGTTAGTTAATTTACGTCACCTTGATATTAGTTACACAAGCATAAGGGAGATGCCACTGCAAATTGTTGAATTAGAAAACCTACAAACTTTAACTGTTTTTGTAGTGGGCAAGCAACAAGGTTTAAGTATCAAAGAGCTTAGGAAGTTTCCTCACCTGCAGGGAAAACTTTCCATCTGGAACCTGCACAATGTCATTGATGCCATGGAGGCATATGATGTCAACTTGAAGAGTAAAGATAAAATTGAGGAGTTAAACCTATATTGGGGAAAATTTACTGAAGACTCACAAAAAGAAAAGGGTGTGCTTGATAGGTTGCAACCGACAATAAACCTGAAGAGACTTGCCATAGGCTCCTATGGCGGGACAAGCTTTCCTAGTTGGTTGGGGGATTCTTCATTTTCTAACATGGTGTCCCTTCACATAAGTGGTTGTGAATATTGTGTAACACTTCCACCATTAGGGCGTCTACCTGCTCTCAAGGACTTAAGAATTCGTAGCTTGACATTAGAAACAATTGGCCCAGAGTTCTACGGGGAAGGTTCCGTTTCTTCATTCCAACCATTTCCATCCCTGGAGTTTCTGGGGTTTTGGTGCATGACAAATTGGAAGGAATGGCTACCCTTTGAAAATGGCAAATTTCCTTTCCCTCGTCTTAAAAAACTGGAGATGCAGAGGTGTCCTGAGTTGAGGGGACATTTGCCAAGCCATCTTTTTTCCATTGAAGAAATTTTAATTTATCATTGTGATCATCTCTTGGCAACACCTCCTACTTTGCATTGGCTGTCGACAATAAAAAAAATTAATATTGGGTCTACTGAAAAGTTCCAATGCTCGTTGCTTGAGTGTGATTCTCCATGTCTGCTGCAGCATATCGACATGAGGTTCCGTGATAAGCTACTATCTCTACCAAAAATGATTCTGAGCAGCACTTGTCTTCGGTATTTGAGACTCGACTATATTCCATCTCTCACTGCATTTCCAGCAAATGGTCTACCTACTTCGTTACAGTCACTTATTATTCATGGATGTGAGAAATTAGCATTCCTGCCTCCTGAAACATGGACCAATTACACTTCCCTTGAGACTTTGGACATTATAGATAGCTGCAACTCACTTACATCCTTCCCATTGGATGGTTTCCCTGTGCTCCAACATCTTCACATTTGCCGTTGTAGTTGTCTAGAATCCATTTTCATTTCAGAGAGTTCTTCCCTTTTGCCGTTAAGCCTCCAATCACTTCATGTCTATGAATGTAAAGCACTTAGATCACTGCCTCAACGGATAGACACCCTTGCTGCTCTTGACTACTTGTCTCTCACAAAACTTGAAAAACTAGAATGGTCGTTTTCTGAAGGAGCTTTCCTGCCTCCTAAATTACGATCATTTAAAATTAACTCCCTAAGACTACCACCTCCAACGCCCATAACTGAGTGGGGTCTCCAAAGCCTGACTGCTCTTTCATATTTGACTATTGGAAGTGATGAGATTGTTAACAGCTTGCTGAAGGGGAATTTGTTGCCTATTTCTCTCGTGTCTCTGCGTATCAGTGATCTCTCTGAAATGAAATCATTAGATGGAAATGGGCTTCAACACCTCTCCTCTCTAGAAAGACTTGAGTTTTATGACTGCCCAAGACTTGAGTCCTTGCCAGATGACAAGTTGCCTTCCTCTCTTAAGATACTGGACATCAACGAATGCCCTTTGTTAGAAGTAAAGTATAAAAGTCAGAGCGGGGAACGTTGGTCCAACATTGCTCACATCCCTGTCATAATTATAAATTATGAAATCACAATATGA 2385 0.4004 MAEGFLEHSQCKKAMEEVGDDFFDELLSRSLIQHSNDGANEEKFVMHDLVNDLATFVSGKSCCRLECDKISESVRHLSYNQERYDISKKFEIFYKFKCLRTFLPIFTPWRRANLSRKVVDDLIPSLKMLRVLSLSWYTNITLLPDSFGNLVQLRYLDLSHTELKSLPDTICNLFNLQTLILLYCESLTELPAHVEKLVNLRHLDISYTSIREMPLQIVELENLQTLTVFVVGKQQGLSIKELRKFPHLQGKLSIWNLHNVIDAMEAYDVNLKSKDKIEELNLYWGKFTEDSQKEKGVLDRLQPTINLKRLAIGSYGGTSFPSWLGDSSFSNMVSLHISGCEYCVTLPPLGRLPALKDLRIRSLTLETIGPEFYGEGSVSSFQPFPSLEFLGFWCMTNWKEWLPFENGKFPFPRLKKLEMQRCPELRGHLPSHLFSIEEILIYHCDHLLATPPTLHWLSTIKKINIGSTEKFQCSLLECDSPCLLQHIDMRFRDKLLSLPKMILSSTCLRYLRLDYIPSLTAFPANGLPTSLQSLIIHGCEKLAFLPPETWTNYTSLETLDIIDSCNSLTSFPLDGFPVLQHLHICRCSCLESIFISESSSLLPLSLQSLHVYECKALRSLPQRIDTLAALDYLSLTKLEKLEWSFSEGAFLPPKLRSFKINSLRLPPPTPITEWGLQSLTALSYLTIGSDEIVNSLLKGNLLPISLVSLRISDLSEMKSLDGNGLQHLSSLERLEFYDCPRLESLPDDKLPSSLKILDINECPLLEVKYKSQSGERWSNIAHIPVIIINYEITI. 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01205 794 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 479 772 - -
Seca2g01205 794 SUPERFAMILY L domain-like 45 488 - -
Seca2g01205 794 Gene3D Ribonuclease Inhibitor 631 775 IPR032675 -
Seca2g01205 794 Gene3D Ribonuclease Inhibitor 484 630 IPR032675 -
Seca2g01205 794 Gene3D Ribonuclease Inhibitor 109 480 IPR032675 -
Seca2g01205 794 SMART LRR_typ_2 150 173 IPR003591 -
Seca2g01205 794 SMART LRR_typ_2 197 220 IPR003591 -
Seca2g01205 794 SUPERFAMILY L domain-like 481 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01205 Seca-Chr2 19532795 19535200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01205 137 226 Receptor kinase-like Gene Family AT3G23110 37.634 6.47e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01205 - - mtr:11408421 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g10939 4 247075974 247079717 Seca2g01205 2 19532795 19535200 PCT