Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01187 ATGGCAGAGGGAAAAGGCAGAGTCTGTATCACTGGAGGAACAGGGTTTCTTGGTTCATGGATCATCAAGAAACTCCTTGAAGATGGTTACTCTGTTAATACCACTATTAGATCTGATCCAGTCTTATTGCTCTATTTTGCATTAACAGAATGTAAGAGAGATGTTAGCTTCCTCACAAATCTTCCAGGTGCATCCCAAAAGCTAAAATTTTTCAATGCTGATCTCAGCAACCCTGAAAGTTTCAATGAAGCAATTGAAGGGTGCATTGGGATATTCCACACTGCTTCTCCAATGGATCATGAAGAAAAGGAGTCAGAGGAAATAGTGACCAAAAGAACCATTGATGGAGCATTAGGCATTTTAAAAGCATGCCTAAATTCAAAGACAGTGAAGAGAGTTGTTTACACTTCAAGTGCTTCTGCTGTTTACTGGCAGGGCAAAGAAGAAGAAGTGATGGATGAGAGTTATTGGAGTGATACCAATTTTCTTAAAGCTTTGAAGCCATTTGCTTGGTCATATTCAATTTCCAAGACATTGGCAGAGAAGGCAGTTCTTGAATTTGGAGAACAACATGGTTTGGATGTTGTGACTCTAATACCTACTTTTATTCTTGGACCTTCCATTTGTCCTAAGCTTCCTGGATCAGTTTATTGCTCACTGGCTTTTTTATTTGGTGACAAGAATCCATTTAGTTTCTCTCGTCTCCATATGGTGCATGTGGATGATGTGGCTAGAGCACATATATTCTTGCTTGAGCATCCTAATCCAAAAGGGAGATATAATTGCTCCCCATTCATTGCAACTATGGAAGAAATAGCTCAACTTATTTCATCCAAATATCCTGAATTTCAAATACCAACACTAGAGGAGCTGAAGAAAAATGAGGGTCCCATGAAGCTTCCACATTTAACCTCCAAGAAACTCATGGATGCTGGATTCGAGTTCAATCATAGCCTTGAGGAAATGTTTGACGATACAATTCAATACTGCAAGGAAAAGGGTTATCTTTAA 1011 0.3907 MAEGKGRVCITGGTGFLGSWIIKKLLEDGYSVNTTIRSDPVLLLYFALTECKRDVSFLTNLPGASQKLKFFNADLSNPESFNEAIEGCIGIFHTASPMDHEEKESEEIVTKRTIDGALGILKACLNSKTVKRVVYTSSASAVYWQGKEEEVMDESYWSDTNFLKALKPFAWSYSISKTLAEKAVLEFGEQHGLDVVTLIPTFILGPSICPKLPGSVYCSLAFLFGDKNPFSFSRLHMVHVDDVARAHIFLLEHPNPKGRYNCSPFIATMEEIAQLISSKYPEFQIPTLEELKKNEGPMKLPHLTSKKLMDAGFEFNHSLEEMFDDTIQYCKEKGYL. 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01187 336 CDD FR_SDR_e 8 313 - -
Seca2g01187 336 Gene3D - 5 336 - -
Seca2g01187 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 327 - -
Seca2g01187 336 Pfam NAD dependent epimerase/dehydratase family 8 261 IPR001509 -
Seca2g01187 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 331 IPR036291 -
Seca2g01187 336 FunFam Dihydroflavonol reductase 5 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01187 Seca-Chr2 19183324 19185103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01187 4 336 Monolignol Biosynthesis Gene Families AT2G02400 36.842 6.89e-62 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01187 - K13265 gmx:102659875 548.125