Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01142 ATGGACTACCAATCACTTGTGCTATTGATTACCTTTGTAAGTGCAAGCATTCTCATCTTCATAAGATTATCATACAACCAAATCCAAAAATCTATTATGCTTCCACCTGGGCCACGCCCATTTCCTATCATTGGAAATATATTTGATCTTGGCACAAATCCACATAAGACCCTCACCAAACTCTCTAAAATTTATGGACCTGTGATGAGTTTGAAACTAGGCAATATAACCACCATAGTAATCTCTTCTCCTCAAGAAGCAAAACAAGTGCTACAAGAGAATGGCCATGCCTTCTCTAATAGGACAGTTCCACATGCCACTCATGCACTTGACCATCACAAATACTCAATTGTGTGGCTTCCCCCATCAACTCAATGGAGGAACCTTAGGAAAGCTTGTGCTACAAAAGTATTCTCCCCACAAATGCTTGACTCCACACAAATCCTTCGTCAACAAAAGGTGCATGAATTGTTGGATTATGTGAAGGAAAGATGCAACAAAGGTGAGGTTGTGGATATTGGTAAGGCTGCTTTTACAACAATCCTTAATTCAATTTCAAACACTTTCTTCTCAATGAATTTGTCTCACTCTACATCTGATGAAAAGTCTCAAGAATTTAAGAACATTATTTGGGGTATCATGGAAGAAACTGGGAGGCCTAATGTTGTAGACTTCTTTCCCATTCTCCATCCACTTGACCCACAACATGTTCATGCCAAGATGTCCAATTATTTCAAGAAATTAACTACGATTATTGATGGAATTATTGAGGAAAGAATGTATTCAAGAGTTTCAAAAACTGATTCCAAGGTGTGCAATGATGTGTTAGATTCATTTCTTAACAATGTTAAAGAAACTAATTCTCAATTGAGCCGCAAAGAGATGTTACATTTGTTCCTGGATTTATTTGTTGCTGGGATTGACACAACATCAAGCACAATTGAATGGATTATGGCAGAGCTATTGCATAACCCAGATAAAGTAGAGAAAGCAAGAAAAGAGTTGTGTCAAACAATTGACAAAGATGTAACACTTGATGAATCACACATCTCAAAGTTGCCTTTCTTACAAGCTGTGGTGAAGGAGACCCTTCGCTTGCACCCTCCAGTTCCATTTTTAGTACCCCACAAGTGTGATGAGGTTGTCAACATATCTGGCTACAAAGTGCCAAAAAATGCACAAGTCTTGGTTAATGTATGGGCCATGGGACGAGATCCAACCATTTGGGAAAATCCAAATATGTTTGCACCTGAAAGATTTTTGGAGTGTGAGATTAACTTTAAAGGCAATAATTTTGAGCTTATACCCTTTGGGGCAGGCAAAAGGATATGCCCAGGATTGCCATTAGCTCATAGGACATTGCATTTAATGGTGGCCTCTCTTCTACACAACTTTGAATGGAAGCTAGCTGATGGGCTACTACCAGAACACATGAACATGAATGACCAATTCGGTTTAACCTTAAAGAGGCTCCAACCTCTTCGAGTTCAAGCTATTTCAATTAAGAATGATAAATTTATATAA 1524 0.3845 MDYQSLVLLITFVSASILIFIRLSYNQIQKSIMLPPGPRPFPIIGNIFDLGTNPHKTLTKLSKIYGPVMSLKLGNITTIVISSPQEAKQVLQENGHAFSNRTVPHATHALDHHKYSIVWLPPSTQWRNLRKACATKVFSPQMLDSTQILRQQKVHELLDYVKERCNKGEVVDIGKAAFTTILNSISNTFFSMNLSHSTSDEKSQEFKNIIWGIMEETGRPNVVDFFPILHPLDPQHVHAKMSNYFKKLTTIIDGIIEERMYSRVSKTDSKVCNDVLDSFLNNVKETNSQLSRKEMLHLFLDLFVAGIDTTSSTIEWIMAELLHNPDKVEKARKELCQTIDKDVTLDESHISKLPFLQAVVKETLRLHPPVPFLVPHKCDEVVNISGYKVPKNAQVLVNVWAMGRDPTIWENPNMFAPERFLECEINFKGNNFELIPFGAGKRICPGLPLAHRTLHLMVASLLHNFEWKLADGLLPEHMNMNDQFGLTLKRLQPLRVQAISIKNDKFI. 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01142 507 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 499 - -
Seca2g01142 507 Gene3D Cytochrome P450 20 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 CDD CYP76-like 62 496 - -
Seca2g01142 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Seca2g01142 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca2g01142 507 FunFam Cytochrome P450 76C4 26 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01142 Seca-Chr2 18366778 18368858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01142 4 502 Cytochrome P450 AT2G45550 44.930 1.33e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01142 - - gmx:100809461 771.926