Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01138 ATGGCCACGAGATCAACGTCAATGACGCCGTACCTCACGGTCTTTGCCCTCCTCATCGCCGCTGCCTCCGCCGCCACCACCGGATACCACAATCACACCGTGGGCAGCACCGCCGGGTGGTTTTTCAACACCACCACCAACACTACCGCTGCAAACTACTCTTCTTGGGCTGCTACTCAAACATTCAACCTTGGCGATTATCTCATTTTCAATACGAACTCGAACCAGACGGTGATTCTTACATACAACAAGACCACCTACCTGAACTGCACCGCCGATGATTCCGACAACGGCACGTTCATATACAGCGGCGGAAGTGGTGGTTTTAACGAGGCGTTGACCATTCCCGTTCCGTTGACCATCGTGGGACCTAACTACTTCTTCTCCGACGCCAGCGACGGCGTTCAGTGCCAGCGAGGACTGGCCTTCGAGATCAACGTCCAGCGCGGCCTCGGCTTGCCGCCGAGCCTCAACCAGCCGCCGCCGCCACCGTATATCGAGCCGCCGGGTCCCGATACCGCTCAGTCTCCACCGGTCACAGTGGCGCAGCCACCGAACAGCGGTGCGTTCGCGAGCCGTGCTGATGTGGCGGTTTACGGCTTCGCTGCGGCGTTGCTGCTGATGCAGTTTCGGTGA 636 0.5896 MATRSTSMTPYLTVFALLIAAASAATTGYHNHTVGSTAGWFFNTTTNTTAANYSSWAATQTFNLGDYLIFNTNSNQTVILTYNKTTYLNCTADDSDNGTFIYSGGSGGFNEALTIPVPLTIVGPNYFFSDASDGVQCQRGLAFEINVQRGLGLPPSLNQPPPPPYIEPPGPDTAQSPPVTVAQPPNSGAFASRADVAVYGFAAALLLMQFR. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01138 211 Gene3D - 29 149 IPR008972 -
Seca2g01138 211 Pfam Plastocyanin-like domain 47 140 IPR003245 GO:0009055
Seca2g01138 211 ProSiteProfiles Phytocyanin domain profile. 30 149 IPR003245 GO:0009055
Seca2g01138 211 FunFam Early nodulin-like protein 18 29 150 - -
Seca2g01138 211 PANTHER BLUE COPPER PROTEIN 26 168 IPR039391 GO:0009055
Seca2g01138 211 MobiDBLite consensus disorder prediction 155 175 - -
Seca2g01138 211 MobiDBLite consensus disorder prediction 152 186 - -
Seca2g01138 211 SUPERFAMILY Cupredoxins 31 148 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01138 Seca-Chr2 18287437 18288850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01138 1 182 Phytocyanin Superfamily AT1G08500 38.947 2.18e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01138 - - gmx:100783106 288.5