Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01123 ATGCAGGAGACAATTGAACGATACCGTAGGCATACCAGAAGTGCTCAACCAGTGCCAAGATCAGATGAACAAAATATGCAGAATTTGAAGCAAGAAACAGCAAGCTTGATGAAGAAGATTGAACTTCTTGAAGCTTCAAAACGGAAACTCTTGGGAGATGGTTTGGGGTCATGCTCCTTAGAAGAACTTCAACAGATAGAACAGCAGTTGGAAAAGAGTGTAAGCACTGTTAGAGCAAGAAAGACTCAGGTTTACAAGGAACAAATTGATCAACTGAAAGAAAAGGTAATTAGTTGTGCTCATAGAGTTATAGTTGACAAGGTGGTTGAACTTGAATTTCATCTTGCATTTGATTTTGTAAAGTGCCAATGA 372 0.3871 MQETIERYRRHTRSAQPVPRSDEQNMQNLKQETASLMKKIELLEASKRKLLGDGLGSCSLEELQQIEQQLEKSVSTVRARKTQVYKEQIDQLKEKVISCAHRVIVDKVVELEFHLAFDFVKCQ. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01123 123 ProSiteProfiles K-box domain profile. 26 123 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca2g01123 123 MobiDBLite consensus disorder prediction 1 17 - -
Seca2g01123 123 Pfam K-box region 22 97 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca2g01123 123 Coils Coil 26 46 - -
Seca2g01123 123 MobiDBLite consensus disorder prediction 1 27 - -
Seca2g01123 123 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01123 Seca-Chr2 18088036 18092647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01123 1 96 MADS-box Gene Family AT2G45660 69.697 3.52e-41 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01123 - - gmx:100784678 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01123 2 18088036 18092647 Seca2g01123 2 18088036 18092647 ECH