Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01118 ATGTTAGTGTCTCAAAATCCTAGCATGTCACTATTAAATATGTTTTTACAGAAACTTTCCAAATCCTTTTCTCTTCTTTGCATTCAATTACTGCTGATCTTGCTGTGCAGTGCTTCAGTTAATGGAGAGGAGCAAAAGAACTTCTACATTGTTTTCTTGGGAGCTGATCCTGTGAGCAGAGACATTGCACTTGAGACTCATTTAAATGTCCTATCAGCTGTGAAGGGAAGTTATCTCGAAGCCAAAGAATCCTTGGCATATAGCTACACAAAGAGCTTCAATGCATTTGCTGCAAAACTTTCTGAGGATGAAGCCAATATGTTATCTGCTATGGATGAAGTGAATTTGGTATTTGAAAATCAGTACCGCAAGCTACACACAACAAGATCATGGAACTTCATTGGGTTACCACTGACTGCTAAGAGAAGATTGAAAGTAGAGAGGGACATAGTTGTTGGTCTTTTGGATACAGGGATCACACCTGAGTCTAAAAGCTTCAAGGATGATGGACTTGGTCCTCCACCAGCAAAATGGAAAGGAAGTTGTGGTCACTATGCAAATTTCACAGGCTGCAATAATAAACTCATAGGAGCCAAATACTTCAAGGCTGATGGAAGAACTGATCCACTTGACATATTATCTCCTATAGATGTTGATGGCCATGGCACTCATACTGCATCAACAGCAACAGGCAATCTGGTCTCTAATGCAAGTCTCTTTGGATTAGCCAATGGGACTGCTCGCGGCGCTGTGCCATCAGCTAGATTGTCAGTTTACAAAGTTTGTTGGTCACTCAGTGGATGTGCAGACATGGACATACTTGCTGCATTTGATGCTGCCATACATGATGGTGTGGATGTCATATCCATTTCCATAGGTGGAGGCAATCCTGATTTTGTTCATGACTCTATATCAGTTGGTGCATTTCATGCCATGAGGAAAGGAATAATCACAGTTGCCTCAGCTGGAAATGATGGTCCAAGTTTGGGATCTGTAACAAATTCTGCACCATGGATTGTAACAGTAGCAGCTAGTGGCATTGACAGATCTTTCAAGAGCACTGTCCATTTGGGGAGTGGAAAGAATATTTCTCCAACTATGGTGGTTATGCAGGGGATAGGAATAAACTGTTTCAATCCAAAACGAAATGAGTACCCTCTTATCAATGGAATTGATGCAGCCAAGGACTCAAAAAGCAAGGATGATGCTAGATTCTGCTACAAAGAAGCCTTAGAGCCAAATAAAGTGAAGGGGAAGGTTGTTTACTGCAAATTAGATTCATGGGGAGCTGAAGCTGTTGTGAAAGAACTTGGGGGCATGGGTGCCATAATAGAAAGTGACCAATACCCAGATGTTGCTCAAATTTTCATGGCCCCTGCTACCATTGTGAATAATAGCATAGGTGAAAGTATTATCCATTATACAAATTCTACAAGATCATCATCAGCAGTGATATATAAGACTCATGAAGAAAAAAGTCCAGCTCCATTTGTTGCTACATTCTCATCTAGAGGTCCAAATTCAGCATCCCAAAATATTCTCAAGCCTGACATTGCAGCTCCTGGCATTGACATCTTGGCATCTTATACTCTTAGGACATCACTCACTGGTTTGAAAGGGGACACACAATTTTCAGAATTTTCTCTATTGTCTGGGACTTCCATGGCATGTCCTCATGTTGCAGGAGTAGCAGCATATGTGAAGTCATTTCATCCAGATTGGACTCCTGCTGCAATTAGATCTGCTATTATAACCACAGCCAAACCAATGAGCAGAAGAATTAACAATGAAGCAGAATTTGCCTTTGGTTCTGGTCAACTGAACCCAACAAGAGCTGTGAGTCCTGGTCTAGTCTATGATATGGATGACTTAGGTTATATCCAGTTCTTATGCCATGAGGGTTACAATGGTTCAACTTTATCAGCATTAGTTGGTTCTCCTGTGAATTGCTCATCTTTGCTTCCTGGGTTTGGCCATGATGCTATCAACTATCCAAGCATACAACTTAGCTTGGAAAGCAACAAAGGCACAAAAATAGGAGTATTTAGAAGAACAGTGACCAATGTAGGTCCTGCTCCAACTATCTTTAATGCTACCATTAGATCACCTAAAGGGGTGGAAATCACAGTGAAGCCTACTATCCTCAATTTTTCTAAAACCAAGCAGAGAAAGAGCTTCAAAGTAGTTGTGAAAGTCAATTCTATTAAAAGTATGCAAATGCTATCAGGTTCCCTTATATGGAGAAGCCCACGTTACATTGTCAGGAGCCCTATTGTTATCTACCGTCAATAA 2292 0.4092 MLVSQNPSMSLLNMFLQKLSKSFSLLCIQLLLILLCSASVNGEEQKNFYIVFLGADPVSRDIALETHLNVLSAVKGSYLEAKESLAYSYTKSFNAFAAKLSEDEANMLSAMDEVNLVFENQYRKLHTTRSWNFIGLPLTAKRRLKVERDIVVGLLDTGITPESKSFKDDGLGPPPAKWKGSCGHYANFTGCNNKLIGAKYFKADGRTDPLDILSPIDVDGHGTHTASTATGNLVSNASLFGLANGTARGAVPSARLSVYKVCWSLSGCADMDILAAFDAAIHDGVDVISISIGGGNPDFVHDSISVGAFHAMRKGIITVASAGNDGPSLGSVTNSAPWIVTVAASGIDRSFKSTVHLGSGKNISPTMVVMQGIGINCFNPKRNEYPLINGIDAAKDSKSKDDARFCYKEALEPNKVKGKVVYCKLDSWGAEAVVKELGGMGAIIESDQYPDVAQIFMAPATIVNNSIGESIIHYTNSTRSSSAVIYKTHEEKSPAPFVATFSSRGPNSASQNILKPDIAAPGIDILASYTLRTSLTGLKGDTQFSEFSLLSGTSMACPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSRRINNEAEFAFGSGQLNPTRAVSPGLVYDMDDLGYIQFLCHEGYNGSTLSALVGSPVNCSSLLPGFGHDAINYPSIQLSLESNKGTKIGVFRRTVTNVGPAPTIFNATIRSPKGVEITVKPTILNFSKTKQRKSFKVVVKVNSIKSMQMLSGSLIWRSPRYIVRSPIVIYRQ. 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01118 763 ProSiteProfiles Serine proteases, subtilase domain profile. 130 613 - -
Seca2g01118 763 Gene3D Peptidase S8/S53 domain 149 623 IPR036852 GO:0004252|GO:0006508
Seca2g01118 763 CDD PA_subtilisin_like 354 485 - -
Seca2g01118 763 Pfam Subtilase family 148 604 IPR000209 GO:0006508|GO:0008236
Seca2g01118 763 Pfam Peptidase inhibitor I9 49 126 IPR010259 -
Seca2g01118 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 81 759 IPR045051 -
Seca2g01118 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Seca2g01118 763 SUPERFAMILY Subtilisin-like 125 617 IPR036852 GO:0004252|GO:0006508
Seca2g01118 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 36 126 IPR037045 -
Seca2g01118 763 FunFam Subtilisin-like protease SBT1.5 149 371 - -
Seca2g01118 763 CDD Peptidases_S8_3 124 587 IPR034197 -
Seca2g01118 763 Gene3D - 348 491 - -
Seca2g01118 763 Gene3D - 630 762 - -
Seca2g01118 763 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Seca2g01118 763 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Seca2g01118 763 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Seca2g01118 763 Pfam Fibronectin type-III domain 662 760 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01118 Seca-Chr2 18013161 18018504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01118 38 601 Subtilisin-like Serine Gene Family AT4G00230 65.603 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01118 - - gmx:100795950 1181.39