Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01083 ATGGTGGAAGATGGTGGAGATGAGGTTGCAGTTGATGCACTTTCCACAGAAGAGTGGTTGTTACATGCAAAGGAACTTGTTCCTATTGCTCTTGATAAGGCAAAAGAGGTTAAGGGGTTTCCTGGTAGATGGAAGATGATCATTTCCAAATTAGAACAGATCCCATCTTGTTTATCAGACTTGTCAAGCCATCCATGCTTCTCAAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTGTCAAAGACACTCAAAGAAGCAATTGAATTAGCTGAGTTGTGTGTGAAGGAAAAGTATGAGGGTAAGCTTCAGATGCAGAGTGATCTTGATGCATTAACTGGGAAACTTGATTTGAATTTAAGGGATTGTGGGCTTTTGATCAAGACTGGTGTTCTTGGTGAGGCTACTTTGCCATTAGCCATGGCTATGTCTTGTTCTGTGGCAGAATCAGATGCTGTAACACACAACAACATAAGGGAATTACTGGCGCGCCTTCAGATCGGTCACTTGGAATCAAAGCACAAAGCTTTAGACAGCCTTGTTGAAGTTATGAAAGAAGATGAAAAAAATGTTTTAGCTGTTCTTGGTAGAAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCAACATCTCCAAGGATAAGAGAGAAGACAGTTACTGTTATATGCTCACTTGTAGAATCAGGAAGCTGTGAGAATTGGCTTGTTTCTGAAGGAGTTCTACCACCTCTCATAAGGCTTGTTGAGTCAGGTAGTGCTGTAGGTAAAGAGAAGGCCACAATATCCCTTCAGAGGCTGTCAATGTCAGCAGAAACAGCACGCGCGATTGTTGGACATGGTGGGGTTCATCCACTGGTTGATCTTTGTCAAACTGGTGATTCTGTTTCACAGGCTGCAGCAGCTTGTACTCTGAAGAATATATCAGCTGTTCCTGAAGTGAGACAGGTTTTGGCTGAAGAAGGGGTAGTGAGGGTTATGATCAATCTTCTTAACTGTGGAATGTTGTTAGGTTCCAAAGAGTATGCAGCAGAATGTTTGCAGAATCTCACTGCAAGCAATGAGAATCTAAGGAGAGGTGTTATATCAGAAGGTGGTGTTAGGAGTCTTTTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCTGCTGTTGGGGCATTGAGGAATTTGGTTGGATCAGTTTCTCAGGAAACTTTGGTTTCATTGGGTTTGCTTCCCCGTTTGGTTCATGTGCTAAAGTTTGGATCTTTAGGTGCACAACAAGCTGCTGCATCTGCAATCTGCAGGGTTTGCAACACATCAGAGATGAAGAAAATGGTTGGTGAAGCTGGGTGTATCCCTCTCCTTGTGAAGATGCTTGAGGCTAAATCAAACAGTGCTAGAGAGGTTGCTGCACAAGCAATTGCAAGCTTGATTGTTCTGTCTCAGAATTGCAGAGAAGTTAAGAAGGATGATAAGAGTGTGCCAAATTTGGTTCAGTTGCTTGATCCAAGTCCACAGAACACTGCAAAAAAATATGCAGTTTCATGCCTTGGATCACTTTCTTCAAGTAAGAAATGTAAGAAACTTATGATCTCATATGGAGCAATTGGGTATCTGAAAAAACTTACTGAGATGGACATTCCAGGGGCTAAGAAGTTACATGAAAGATCGGAGAGAGGGAAATTAAGAAGTTTATTTAGCAAGAAATAG 1689 0.4204 MVEDGGDEVAVDALSTEEWLLHAKELVPIALDKAKEVKGFPGRWKMIISKLEQIPSCLSDLSSHPCFSKNALCKEQLQAVSKTLKEAIELAELCVKEKYEGKLQMQSDLDALTGKLDLNLRDCGLLIKTGVLGEATLPLAMAMSCSVAESDAVTHNNIRELLARLQIGHLESKHKALDSLVEVMKEDEKNVLAVLGRSNIAALVQLLTATSPRIREKTVTVICSLVESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETARAIVGHGGVHPLVDLCQTGDSVSQAAAACTLKNISAVPEVRQVLAEEGVVRVMINLLNCGMLLGSKEYAAECLQNLTASNENLRRGVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVSQETLVSLGLLPRLVHVLKFGSLGAQQAAASAICRVCNTSEMKKMVGEAGCIPLLVKMLEAKSNSAREVAAQAIASLIVLSQNCREVKKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERSERGKLRSLFSKK. 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01083 562 Gene3D - 154 336 IPR011989 -
Seca2g01083 562 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 14 560 - -
Seca2g01083 562 Pfam Armadillo/beta-catenin-like repeat 433 470 IPR000225 GO:0005515
Seca2g01083 562 Pfam Armadillo/beta-catenin-like repeat 273 309 IPR000225 GO:0005515
Seca2g01083 562 SMART arm_5 432 472 IPR000225 GO:0005515
Seca2g01083 562 SMART arm_5 473 515 IPR000225 GO:0005515
Seca2g01083 562 SMART arm_5 310 351 IPR000225 GO:0005515
Seca2g01083 562 SMART arm_5 352 391 IPR000225 GO:0005515
Seca2g01083 562 SMART arm_5 392 431 IPR000225 GO:0005515
Seca2g01083 562 SMART arm_5 187 227 IPR000225 GO:0005515
Seca2g01083 562 SMART arm_5 269 309 IPR000225 GO:0005515
Seca2g01083 562 SUPERFAMILY ARM repeat 158 539 IPR016024 -
Seca2g01083 562 Gene3D - 337 545 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01083 Seca-Chr2 17373815 17377576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01083 208 470 U-box Gene Family AT3G54790 29.478 6.51e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01083 - - gmx:100781453 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01083 2 17373815 17377576 Seca2g01083 2 17373815 17377576 ECH