Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01068 ATGGCGAACCCAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTGCAGGCAAATGAGGTTGAGCTACGAGGTTGCAAAATCAAGTACTGTGATTCCAGAAAAGGATTTGGCATCTTTTCTGATAAAGATGTTTCTGACGGTGTTCTGTTGGTTGTTCCACTAGATTTAGCAATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGAATGTAGAGCAATGTTTGAGGAAGGAGATGTAGATGACAGGTTATTAATGATGCTGTTACTGACAGTGGAGCGTTTGCGTAAGAATTCTCTATGGAAGCCGTACTTTGATATGCTTCCAACCTCTTTCGGAAATTCACTTTGGTTTAGTGATGATGAACTTCAAGAATTAAGAGGAACAACATTATATCGTGCAACTGAATTGCAGAAGAAAAGCCTGCTGTCTTTGTATGAAACTAAAGTGAAGGATTTAGTGAAGAAACTTTTGACTCTTGATGGAGATTCAGAGATTGAGGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTTTGGAGCCGTGCTTTGAACATTCCAATGCCTCGTTCTTATGTATTTCCAGAAATGCAAGAAGTTCATGAAAGTTGCATTCCAGAAGCTGATGAAAAAGAATGTTTTATTGCAGGCAGTGAAAATCTAACCAAGGAAATGACAAGTAGCACAGTGCAAGGAGACACCGTTTGGGTAGAGGGCCTTGTCCCTGGCATTGACTTTTGCAACCATGATCTCAAGCCAATAGCAACATGGGAAGTTGATGGAACTGGTTTAACAACAGGAGTTCCTTCCTCCATGTATCTTCTTTCAGCTGCTCAAAGTCCCTTGCAGATTGAACGTGAAATTTCCATTAGTTATGGCAACAAAGGGAATGAGGAACTTCTATACCTGTATGGTTTTGTCATTGATGATAACACAGATGACTATCTCATGGTCCACTATCCAACAGAAGCAATTAATAATATTTCTTTTTCAGAATCCAAGGGCCAGCTTCTTGAAGCACAGAAGGCAGAAATGAGATGTCTTTTACCCAAAGCTCTGCTGGATCATGGATTTTTTCCATTAGGAACCCAAAACAGTGGAGAAAATAACAAGTGCAACCAAGTTTCTAACTACAGTTGGAGTGGTCAACGCAAGATGCCATCTTATGCAAACAAGCTGGTTTTTCCTGAGAAATTTATGACTGCCTTGAGGACCATAGCCATGCAAGAAGATGAGCTTTACAAGGTTTCCTCAATGCTGGAAGAGCTTGTTGGACCTGAAGGGGAGAGACAACTATCAGATATAGATGTCCAATCAGCAATATGGGAGGTTTGTGGTGATTCTGGAGCTTTACAAATGCTTGTTGATCTTCTTCGTGTCAAGTTGATGAATCTTGAAGAGCATTCCGGAACAGAGGAAAGTGACCTTGATTTGCTCAAGAAGGCCCTTATCATTGATAGCCAGGAAAATAGCAAACATGACATGAGCAATTTAAGCACAATGGCAAATGAGTCACAGGAAACAGAACTGATGACTAGAAACAAATGGTCTGCTATAGTATATCGGCGAGGCCAAAAGCAGCTAACTCGATTATTCTTGAAAGAAGCAGAACATGCTCTACAGTTATCACTGGATGAAGAGGTGACTGTTCCTTGA 1665 0.409 MANPEAKLETFMQWLQANEVELRGCKIKYCDSRKGFGIFSDKDVSDGVLLVVPLDLAITPMRVLQDPLLGPECRAMFEEGDVDDRLLMMLLLTVERLRKNSLWKPYFDMLPTSFGNSLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDLVKKLLTLDGDSEIEVCFEDFLWANSVFWSRALNIPMPRSYVFPEMQEVHESCIPEADEKECFIAGSENLTKEMTSSTVQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGLTTGVPSSMYLLSAAQSPLQIEREISISYGNKGNEELLYLYGFVIDDNTDDYLMVHYPTEAINNISFSESKGQLLEAQKAEMRCLLPKALLDHGFFPLGTQNSGENNKCNQVSNYSWSGQRKMPSYANKLVFPEKFMTALRTIAMQEDELYKVSSMLEELVGPEGERQLSDIDVQSAIWEVCGDSGALQMLVDLLRVKLMNLEEHSGTEESDLDLLKKALIIDSQENSKHDMSNLSTMANESQETELMTRNKWSAIVYRRGQKQLTRLFLKEAEHALQLSLDEEVTVP. 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01068 554 Gene3D set domain protein methyltransferase, domain 1 5 310 - -
Seca2g01068 554 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 508 - -
Seca2g01068 554 CDD SET_LSMT 31 310 - -
Seca2g01068 554 Pfam SET domain 35 296 IPR001214 GO:0005515
Seca2g01068 554 SUPERFAMILY SET domain 7 314 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01068 Seca-Chr2 17228382 17236890 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca2g01068 SET 6.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01068 - - gmx:100777394 913.679