Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01062 ATGGCTGAAACACTGCTATTCTGTGTTGCAGACTCACTTATAGGGAAGCTTGCTTCTCGTGCAGTTGAAGAAGCTACTCTGGTGCTGGGTGTGTATGATGATCTGCAAGAGATCAAAGACACCGTGTTATTAATCAAAGCTGTGTTGTTGGATGCTGAGCAAAAGCAGGAGCAGAACCATGAGTTGTGTGAATGGCTGAGACAGATTAAGCATGTCTTCTCTGATGTTGAAAACATAATCGATGATTTTGAGTGTGAGGATTTAAGGAAGCATGTGGTCAACACTTATGGTAGCAATGCAAGGAAGGTAAGCCGTTTCTTCTCATGTTCTAATCCTTTTGTTTACCGTTTAAGAATGGCACATCAGATCAAAGATATCAAAAAGAGATTAGACAAGGAAGGGAACACGATAAAGAAAAAATTAGAGAGCCTCTTATTGCTTGATGGTGATGATGCAAGTCTCTCTGTCATCCCCATTGTGGGAATTGGAGGCTTGGGAAAGACCACACTTGCAAAGTCAGTCTTCAATGATAAGAGTATAGATGAGTCTTTTCCATTAAAGATGTGGGTGTGTGTATCTGATGATTTTGAACTTAAGCATGTGCTTGTTAAAATCCTCAATTCTGCTGCTGTCAGTCCTTCTGTTCCTACTCCATTTCACCAAGAAAACTTTAGAAACTTTGATATGGAGCAACTACAAAACCATCTAAAAAGAACACTTACTGGTCAAAAGTTCTTGCTTGTCTTGGATGACATATGGAGTGAGGATCGTGTTAAATGGGTAGAGTTGAAGAATTTAATACAAGTAGGTGCTGGAGGAAGTAAGGTCCTAGTAACTACACGTAGCCACTCAATAGCTACCATGATGGGCACTAACTCATCTTACATCTTACAAGGTCTTTCTCAAGAGGATTCCTTATCTGTATTTGTCAAATGGGCTTTCAAAGAAGGGGAAGAGAAAAAGTATCCAGAATTGTTGGAGATTGGGAAACAAATTGTGCAAAAATGTGGAGGGCTTCCGTTGGCTGTAAGAACATTGGGGAGTTCATTATTCTTAAAATTTGATATAGAAGAGTGGGAGTTTATTAGAGATAATGAGATTTGGAATTTACCACAAAAAGAAGGTGACATTTTGCCTGCCCTCAAATTAAGTTATGATCAAATGCCTTCATATTTAAAACGATGTTTTGCTTGCTTCTCCCTTTTCAAGAAGGACTTTAGTTTTCTTAGTTTTCGTATTAGTTTGCTTTGGGAAGCACTTGATTTTCTTCCAACATCACCAAAGAAAGGTAAAACATTGCAAGATGTTGGCAATCTTTTTTTGCACGAGCTGCAATCAAGATCTTTTCTTCAAGATTTTATTGATTATGGTAGTGCTTGCACATTTAAACTACACGACTTGGTGCATGATCTGGCATTGTATGTTGTAAAAGATGAATTTCAACTATTGAATTCCCCAAGTGAGAATATATCTGAGACTGCCCTGCACTTGTCATTTATTAAAAGTGATTTGCTTAGCCAAGCTCCCATTCCCATTGGTCTGAGAACCATATTTTTTCCTGAAGGAGCCAATAACGAAGCTTTCTTGAATACAGTGGTGACGAAATGCAAATACTTGCGAGTTTTGGCTTTATGTCATTCTGAATATGTGAATTTGCCTTGCTCCATTAGTAAGTTGAAACATTTAAGATGTCTAGATCTTTGTCATAATAAAAAACTAGAGAGACTCCCTAATTCAGTATGCAAACTTCAAAATTTGCAAACTTTGATTCTCGGAGGATGCACAAATCTACAAACATTGCATAAAGGATTAGGAAACTTGATTAGCCTCCGGCAGTTGCATATAACCACAAAACAGTCTAATTTTCTGGACAAAGAGATTGCAAAATTGACTTCTCTAGAAGTTTTATCCTTCACTGCTTGTGACAATTTGGAGTCATTGTTCGAAGGGATACGACTCCCTAGTCTTAAAGTCTTGTATATTGAATCTTGTGGGAGTCTAAAGTCTTTGCCGTTTCATGTTATTCCAAACTTAAAAAGTTTGATGATTAAAAGCTGCAATAAGTTGGATTTGTCAATGGGTCATGGTAACCAAATCCCTGAGCTAAGGTTAAAGTTACTATATCTTGAATGTTTGCCAAAGCTGGTGACTTTTCCTCATTGGGTGCAAGGATCTGCAAAAACATTACATTCTTTAGTAATTGAAGGCTGCAACAATCTTGAGGAGCTTCCTGAGTGGCTGTCAACTCTAATTGGTCTCAGAACATTCTTTATTATTGATTGTCCAAAGCTGCTTTCACTCCCTCATGACATGCATTGCCTCCCCAACCTTGAACATTTAGCAATTAAAAATTCTCCTGAATTATTTAGAAGATACCAACCAGAAGTTGGACAGGATTGGTTCAAAATATCCCACATCAAACGAGTTACCATTGAGGAACCAGAAGAGAAAGGAGAATTCTTGGATAACAAAGTAAAAAATTGA 2484 0.3772 MAETLLFCVADSLIGKLASRAVEEATLVLGVYDDLQEIKDTVLLIKAVLLDAEQKQEQNHELCEWLRQIKHVFSDVENIIDDFECEDLRKHVVNTYGSNARKVSRFFSCSNPFVYRLRMAHQIKDIKKRLDKEGNTIKKKLESLLLLDGDDASLSVIPIVGIGGLGKTTLAKSVFNDKSIDESFPLKMWVCVSDDFELKHVLVKILNSAAVSPSVPTPFHQENFRNFDMEQLQNHLKRTLTGQKFLLVLDDIWSEDRVKWVELKNLIQVGAGGSKVLVTTRSHSIATMMGTNSSYILQGLSQEDSLSVFVKWAFKEGEEKKYPELLEIGKQIVQKCGGLPLAVRTLGSSLFLKFDIEEWEFIRDNEIWNLPQKEGDILPALKLSYDQMPSYLKRCFACFSLFKKDFSFLSFRISLLWEALDFLPTSPKKGKTLQDVGNLFLHELQSRSFLQDFIDYGSACTFKLHDLVHDLALYVVKDEFQLLNSPSENISETALHLSFIKSDLLSQAPIPIGLRTIFFPEGANNEAFLNTVVTKCKYLRVLALCHSEYVNLPCSISKLKHLRCLDLCHNKKLERLPNSVCKLQNLQTLILGGCTNLQTLHKGLGNLISLRQLHITTKQSNFLDKEIAKLTSLEVLSFTACDNLESLFEGIRLPSLKVLYIESCGSLKSLPFHVIPNLKSLMIKSCNKLDLSMGHGNQIPELRLKLLYLECLPKLVTFPHWVQGSAKTLHSLVIEGCNNLEELPEWLSTLIGLRTFFIIDCPKLLSLPHDMHCLPNLEHLAIKNSPELFRRYQPEVGQDWFKISHIKRVTIEEPEEKGEFLDNKVKN. 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01062 827 Gene3D Ribonuclease Inhibitor 513 815 IPR032675 -
Seca2g01062 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 398 IPR027417 -
Seca2g01062 827 CDD RX-CC_like 9 132 IPR038005 -
Seca2g01062 827 Gene3D - 299 383 IPR042197 -
Seca2g01062 827 FunFam Probable disease resistance protein At1g61300 120 294 - -
Seca2g01062 827 Gene3D - 10 119 - -
Seca2g01062 827 Gene3D - 120 297 IPR027417 -
Seca2g01062 827 Gene3D - 384 474 IPR036388 -
Seca2g01062 827 Pfam Rx N-terminal domain 11 98 IPR041118 -
Seca2g01062 827 SUPERFAMILY L domain-like 463 784 - -
Seca2g01062 827 PANTHER DISEASE RESISTANCE PROTEIN RP 35 712 IPR044974 GO:0006952
Seca2g01062 827 PRINTS Disease resistance protein signature 557 573 - -
Seca2g01062 827 PRINTS Disease resistance protein signature 156 171 - -
Seca2g01062 827 PRINTS Disease resistance protein signature 336 350 - -
Seca2g01062 827 PRINTS Disease resistance protein signature 239 253 - -
Seca2g01062 827 Pfam NB-ARC domain 146 385 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01062 Seca-Chr2 17155754 17158346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01062 139 769 WRKY Transcription Factor Family AT5G45050 23.089 1.91e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01062 - - gmx:100780033 980.319