Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g01037 ATGGCTTGTAGTTTGTCACAGTCAAAAATGTTACACGGAGGTGTGGAGACAAGTTTCAGACACGGATCAGTTGGTCAAGTAGGTCGTTTTGATTTTAGAGGAAGAGGTTTTGGTTATGCATTTCTTGCCAACTCAAGAAATACTCTGAGATTGCGTTTTAGTGGGATGAACAGAGTTAGTGGTATTTCTGCTTGTTGGAATAATTCAAGAGTGGTTTCTGGTGGTGAGTTTAAAGTTTTGAATACAAAGAAAAGTGTGTACTGTAAGAATAATAATCTTTTTATGGGGTCTAGAGTAATTTGGTCAAAGTGTCAGGGTAATGATTCTATAGCTTATGTTAATGGCAATGGCCGCAATGTTGATTATGTGGAAGGTTCAGGTGAGGATGTAGGGCTTGGATCCGTTTCTAGTGCTGAACTGGATGCATCGTTGGAAGAAAAGAAAGGGCAAGCTGAGACAGAAGGAGGGAGTGAAATAGGAGTAGAGGAACAAAGTGTGGATGAACTGAAAGAACTATTACAAAAGGCCTTGAAGGAACTAGAAGTTGCACAAATAAATAGTACTATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTTTTTGCATGATGAAGCAGCACGTTCTTGGAATGATGTTAATTCTGCTCTTGACACCATTCAAGAAATTTCAAATGAAGAAGTTATGGTCAAAGAAGCTGTCCAAAATGCAACTATGGCTCTTTCATTAGCCGAGGCAAGGCTTCAAGTAGCCATAGAATCTTTGGAGGTTGCAAAAGAAGTGCCTGATTCAGAGCAAGGTTCTAATGAGGACAATGGTGATAAAGGCATAACGGAAGCAGAGAAAGCACTTTTCATTGCTCAAGAAGATATTAAGGAATGTCAGGCAAATTTAGCCAATTGTGAGGCTGAGCTGAGGCGCTTGCAAAATAGAAAGGAGGACTTGCAGAAGGAAGTGAACAAATTGCAAGAAGTTGCTGAAAAGGCACAGCTGAATGCAGTGAAAGCTGAGGAGGATGTTACAAACATAATGCTTTTAGCGGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACACAACGTGTAAATGATGCTGAGATTGCCTTACAGAGAGCAGATAAGTCTGTTTCTAATTTGAATGCTGATACCGCAGAAACTATTACAATTCAAGATGCTGAGCCTGTTCCTGAGGAGAAAGTGGCTCAAGGTCTTTCTGGTGATGTCACTGTTGAAAGAGACAGAGATGTGGCAAATGATGACGAATCTTTGCTTGCCAAATTATCACCTGAAACACTATCTGATAAAACCAGCCAAGTCTCAGAAGACATTACACAGTCTGAATATTTGAGTGATAATGAGAATGCTGTACAAACAAAAAAGCAGGAAACACAGAAAGATTTGACTAGAGATAGTTCACCCTTTGCTCCCAAGGCATTACTAAAGAAGTCTTCTCGATTCTTTTCTGCATCGTTCTTTTCTTTTACTGAAGATGAAGCTGAGTCCACACCAGCATCAGTTTTCCAAGGCCTCGTGTTATCTGCAAAGAAGCAGTTGCCCAAGCTTGTTATTGGGTTGTTGTTAATGGGAGCAGGGGTTGCGTTCTATACCAATAGGGTAGAGAGGAATTCTCAGCTGCTTCAACAGGCAGATGTTATTGTGACTAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCTCTGGTTAGACGACTTCAGAAACTCCCCAAGAAAATTAAGAAAATCATTGCATCATTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTTCCAATATTTCAAAAAATCCCTGGAGGCAGTCCGGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATTATTCGTCATGTTCATGGGACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTTTTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTTTTTGGATTAGGCTCTGCACAGGTTTTAGCAACTGCTGTAGTTGTTGGCTTGGTGGCTCATTATATTTGTGGCCAACCTGGCCCTGCTGCTATTGTCATTGGGAATGGCCTGGCATTATCATCTACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGACGAGCTACATTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTCGTCTTATTAATCCTCATACCCCTAATTTCACCTAGTTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGTCTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGTGGACGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCAGAAATATTCTCAGCCAATACACTCCTTGTTATTCTTGGGACTAGTCTTCTTACAGCCAGGGCAGGACTTTCCATGGCATTGGGAGCATTTTTGGCTGGTTTACTACTTGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGGCTATTCTTTATGACGGTAGGAATGTCAATCGATCCAAAACTTTTTGTTTCAAACTTCCCAGTCATTGCAGGGACATTGGGACTCTTAATATGCGGCAAGACTATCTTGGTTTCTTTGATGGGTAGAATCTTTGGGATTTCCCTTATTCCTGCCATTAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTAGCCAGCTCTCATCTTTGCTGTTTCTTGTTGTGGGGATTTCAATGGCTATCACACCATGGCTAGCTGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGCATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACTGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTAGGCCAGATCATTGCGCAACTTCTTTCTGAGCGACTTATTCCGTTTGTTGCACTGGATGTGAGAGGTGATAGAGTGGCAATTGGGCGAGCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCTTACATAAGGTTGGGGCTGAAAGGGCATGTGCTGCAGCAATAACTTTAGATACACCTGGATCAAATTATAGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCCCATGACGTTGATCATGGATTGAATTTGGAAAAGGCTGGAGCTACTGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTGCTCAGGCTAAACTCCCCACATCAGAGATTGCAGCAACTATAAATGAATTCAGATGCCGTCATCTTGCTGAGCTCACAGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATATACTAGAATTATGAGCAAACCCAAGTCTCAATCCCCAGATTCATTGGACGAGACCCAAGTCTCTGAAGGGAAACTGGCAATATGA 3606 0.4232 MACSLSQSKMLHGGVETSFRHGSVGQVGRFDFRGRGFGYAFLANSRNTLRLRFSGMNRVSGISACWNNSRVVSGGEFKVLNTKKSVYCKNNNLFMGSRVIWSKCQGNDSIAYVNGNGRNVDYVEGSGEDVGLGSVSSAELDASLEEKKGQAETEGGSEIGVEEQSVDELKELLQKALKELEVAQINSTMFEEKVKKISETAIFLHDEAARSWNDVNSALDTIQEISNEEVMVKEAVQNATMALSLAEARLQVAIESLEVAKEVPDSEQGSNEDNGDKGITEAEKALFIAQEDIKECQANLANCEAELRRLQNRKEDLQKEVNKLQEVAEKAQLNAVKAEEDVTNIMLLAEQAVAFELEATQRVNDAEIALQRADKSVSNLNADTAETITIQDAEPVPEEKVAQGLSGDVTVERDRDVANDDESLLAKLSPETLSDKTSQVSEDITQSEYLSDNENAVQTKKQETQKDLTRDSSPFAPKALLKKSSRFFSASFFSFTEDEAESTPASVFQGLVLSAKKQLPKLVIGLLLMGAGVAFYTNRVERNSQLLQQADVIVTSVEEVSSSAKPLVRRLQKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVVVGLVAHYICGQPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPSSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLFVSNFPVIAGTLGLLICGKTILVSLMGRIFGISLIPAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRGDRVAIGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGSNYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRCRHLAELTELCEASGSSLGYGYTRIMSKPKSQSPDSLDETQVSEGKLAI. 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g01037 1201 MobiDBLite consensus disorder prediction 393 472 - -
Seca2g01037 1201 Gene3D - 1001 1165 - -
Seca2g01037 1201 Coils Coil 363 383 - -
Seca2g01037 1201 FunFam K(+) efflux antiporter 2 chloroplastic 1001 1165 - -
Seca2g01037 1201 FunFam K(+) efflux antiporter 2 chloroplastic 593 979 - -
Seca2g01037 1201 Pfam Sodium/hydrogen exchanger family 603 973 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca2g01037 1201 MobiDBLite consensus disorder prediction 430 458 - -
Seca2g01037 1201 MobiDBLite consensus disorder prediction 1180 1201 - -
Seca2g01037 1201 Coils Coil 279 341 - -
Seca2g01037 1201 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 201 1191 - -
Seca2g01037 1201 Pfam TrkA-N domain 1006 1119 IPR003148 GO:0006813
Seca2g01037 1201 Coils Coil 159 186 - -
Seca2g01037 1201 Gene3D - 593 981 IPR038770 -
Seca2g01037 1201 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1002 1143 IPR036291 -
Seca2g01037 1201 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 604 884 IPR004771 GO:0006812|GO:0008324|GO:0016020
Seca2g01037 1201 ProSiteProfiles RCK N-terminal domain profile. 1005 1127 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g01037 Seca-Chr2 16780698 16798740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g01037 88 1201 Inorganic Solute Cotransporters AT4G00630 70.344 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g01037 K03455 - gmx:100798822 1864.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g01037 2 16780698 16798740 Seca2g01037 2 16780698 16798740 ECH
Seca4g11248 4 251013364 251029932 Seca2g01037 2 16780698 16798740 PCT