Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00986 ATGCCAATGGCAAAGAGGTCCCAGAGATTCCCTGTGCAGTATGAGAAAGATCAGTCGGGTTGTATGTGGGGTTTTATTAGTATATTTGATTTTCGCCATGGCCGCTTCACTCGGAAGTTGATCGCAGATAGGAGGCACAGCAGCAAGCATGCTGTTGGTTCTATACTTACCAAGAACAAATTTGAGACGTTGAGCAATTTGGATGAAGAATATCAAGGAAATTTTGACAGAGGAGAGAGTAAGAGGTTAACAGTGACAACTGATGCTGATAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAGATGTTCATTGATCAGGATGACATGAAGGATCAAGGTAATGTTGAAGTAGAATCAAAGCGATCCAGCTTAGGGCGTGAAGACTCCTTGAAGAAAGATTCCAAAAGAAAAAAGAAATCTCGCAAGAAGAGCCGTGATATGGACACCCATGATTCCAATATGACCTTTGAATTCTCACATAATCAGCATTCAAAGCAACAATCAAAAGATAATATTGATTTGGACAAGATAATGGAAGACTTTTGTCATATCGAAGCTGTTTGTTCCATGATGCATGACAATGATGGCAAAGTTAATGCACAATCAAACCAAAAGCATGTTGTTTCTGAAGATCTTGCAAGAGATGCAGTCCATGAATTTGTGAATCAGATGGTATCAAATGGGAAAGATGTGGTAGAAGATAGAAACTTCCTTTGCTCACATGAACTTGTGGAAGCACTTCAGGTTATAAGCTCAGATAAGGAATTGTTCCTTAGACTTCTACAAGATCCAAATTCACACTTACTGAAATATATTCAGGAGTTGGAGAATGCTCAGGGGAGAAGAGACAAAGCATACAGTTCAGTTACTGGCTCCAACTTCTCTGAACAAGACCTTGACAATCTGAAACAAACTAGGGAGATTGTCAGCCACAAGCATCGTAACTTTTTCAGGAAAAAGGTAAAGTCTCAATCAAAAGGTCCAACAGATAACGATGGGAAAATTAAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAATGGGCATGCAAAATTCTGAAAGTGAAAACAACCTTGCCTCATCACTAGATTCTCAAGATATTGTCCATTACAAAGGTCCTTCTGTGCGCGTTAGTTCACATTTTTCTCTTACAGAGATAAAAAAGAAACTAAAACTTGCTATGGGAAAGGAGAGACATAGAAACCCTGAACGTCAAAATATGGGGCCAGGAGGCAATGCCATTGGTAAAGATAATGTTGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATTGCAAAACCTATGTTTGATGTTATGAAAGGAAACAAGACCGGTGCATTGAAAGACTCTGAATTTAATTTGGATCATGAAAGTGGTACTCCCAAAGAAAGGGTTTCTAACATATATATTGAGGCTAAGAAACATCTCTGTGAGATGCTAGAAAATGGAGATGACAACATAAACATTTCAAGCAGCCAGATACCCAAAACCCTTGGGAGAATACTATCTCTTCCTGAGTACAACTTTTCTCCTCTTGGAAGTCCTGGACGAAATTTGGAGTATCATTTTGTGACTGCACAGGCAAGATTTTCTACTTCAGATAAAACTTGTGAGCTTAATGAGGATAATTTGTCTCCCAAACAAGCAGCCTCTATTAGTCATCTGGATCAGGAAACAAACAATTCAGAGAACCAGTCAAGCATTTATGATGAAAGCTCTAATAATGAAGTACTAGAAATTAAGTCCGAGTCAACTCTCTCTCATGATCTTGGTCATGTTGATACTGTTGAAGCCTGCTACCCTGTTAGAGATGAGATAGTTACTGAAGGTAATTTAGAATCTACAAGAGAGATAAATGTTTTGGAATTTTCCTCGGATCCAATTGACTTCACTGTAGGGAAGGACCAAAATCATGATATCTCAGAAATTCCTGATGGTGCTAGATGTTCTGAATCTGAATGTTCAAATGAGGATGTAACAGAAGACAACCAACCATCATCTCCGCCGTCATCCCCTCCTCACTCTTCCATCACTAAGAAAATTGAAGAGCTAGAAAGTAGTGCAGATGTATCTGGGCGACCAAGTCCTGTATCTGTACTCGATATACCATTCTCAGATGATGACTTCAGTCCTGGGTACTCCAGATGTCAACCTGTTAAATTACCAGTACAACCACTACAAATTCAATTTGAAGAACACGACTCTTCACCTGTGGATCAATTTGACAGAGGAAGATATCGTCTTGAAGAAAATGAATTGATATATGACTACATTAATGTTGTCTTGCACGCCTCCGGCTTGACTAGGGATGAATTGTTGATGAAATGCCTTTCCTCAGACAACATACTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTTTTCAAACCTGCTTTGCCATGATCAGAAGATCCTATTTGACTGTATCAACGAAGTTCTCATGGAGGTTTGTTGGTATTACTTTGGGGTCTCACCTTGGGTATCATTTGTAAATCCTAGCATAAGGCCAACTCCAAATATGAAAAAGGTCATTGTCACGGTGTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCACCACATACTTTGGAGCAAATTGTTAGGAAAGACATGGCAAGAAGGGGAACATGGATGGACCTTCAACTTGATGTTGAAGCAGTTAGTTGTGAAATGGGCGATGCCATTCTTGCAGAACTGATGGAAGATACAATTTTGAGCCTTGTGAGTGAAAGTACAGAAAGCAAATGTTCCCTGGTTCAATTTGAATTGAAGGACAATGAGAGCAGCATTAACTTGTAA 2817 0.393 MPMAKRSQRFPVQYEKDQSGCMWGFISIFDFRHGRFTRKLIADRRHSSKHAVGSILTKNKFETLSNLDEEYQGNFDRGESKRLTVTTDADKLSVKKLIEEEMFIDQDDMKDQGNVEVESKRSSLGREDSLKKDSKRKKKSRKKSRDMDTHDSNMTFEFSHNQHSKQQSKDNIDLDKIMEDFCHIEAVCSMMHDNDGKVNAQSNQKHVVSEDLARDAVHEFVNQMVSNGKDVVEDRNFLCSHELVEALQVISSDKELFLRLLQDPNSHLLKYIQELENAQGRRDKAYSSVTGSNFSEQDLDNLKQTREIVSHKHRNFFRKKVKSQSKGPTDNDGKIKFSNRIVILKPALMGMQNSESENNLASSLDSQDIVHYKGPSVRVSSHFSLTEIKKKLKLAMGKERHRNPERQNMGPGGNAIGKDNVGMRSPNKDHFFIEKIAKPMFDVMKGNKTGALKDSEFNLDHESGTPKERVSNIYIEAKKHLCEMLENGDDNINISSSQIPKTLGRILSLPEYNFSPLGSPGRNLEYHFVTAQARFSTSDKTCELNEDNLSPKQAASISHLDQETNNSENQSSIYDESSNNEVLEIKSESTLSHDLGHVDTVEACYPVRDEIVTEGNLESTREINVLEFSSDPIDFTVGKDQNHDISEIPDGARCSESECSNEDVTEDNQPSSPPSSPPHSSITKKIEELESSADVSGRPSPVSVLDIPFSDDDFSPGYSRCQPVKLPVQPLQIQFEEHDSSPVDQFDRGRYRLEENELIYDYINVVLHASGLTRDELLMKCLSSDNILDPSLFDQVEFFSNLLCHDQKILFDCINEVLMEVCWYYFGVSPWVSFVNPSIRPTPNMKKVIVTVWEGVCWHVLPLPPPHTLEQIVRKDMARRGTWMDLQLDVEAVSCEMGDAILAELMEDTILSLVSESTESKCSLVQFELKDNESSINL. 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00986 938 MobiDBLite consensus disorder prediction 637 682 - -
Seca2g00986 938 MobiDBLite consensus disorder prediction 395 421 - -
Seca2g00986 938 MobiDBLite consensus disorder prediction 637 660 - -
Seca2g00986 938 Pfam Domain of unknown function (DUF4378) 761 908 IPR025486 -
Seca2g00986 938 MobiDBLite consensus disorder prediction 109 134 - -
Seca2g00986 938 MobiDBLite consensus disorder prediction 109 169 - -
Seca2g00986 938 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 3 913 - -
Seca2g00986 938 MobiDBLite consensus disorder prediction 557 578 - -
Seca2g00986 938 Pfam Protein of unknown function (DUF3741) 222 266 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00986 Seca-Chr2 15878817 15890278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00986 3 896 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.444 8.68e-109 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00986 - - gmx:100783243 1337.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00986 2 15878817 15890278 Seca2g00986 2 15878817 15890278 ECH
Seca4g11302 4 251564898 251569269 Seca2g00986 2 15878817 15890278 PCT