Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00950 ATGCTTTCCAGAGATATCAAGACTGACAACTTGCTGCTAGATAGAAACGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTACTGGAATCAACAGAAGTGGAGCCCTTCAGAGCAATGGACATCCTGTTCCTGTGGCTCCCAGAAGAACTCAGCAGGAGCAACTGCAGCATTGGCAGAAAAATAGGCGAATGCTTAAGGCGTATTCTACAGATGGGACACCTGACTATATTGCCCCTGAAGTTCTACTGAAGAAAGGATATGGCATGGAATGTGATTGGTATTATATATCGTTTTTTTTTTTTTGTATTTTTCCTTTTCAAAAACACCTTCAAGTTTTCACTTTTCATGGTTTATTTAAACTTCGTATTCTTTCAATATATTCTGATTAG 432 0.3796 MLSRDIKTDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSTGINRSGALQSNGHPVPVAPRRTQQEQLQHWQKNRRMLKAYSTDGTPDYIAPEVLLKKGYGMECDWYYISFFFFCIFPFQKHLQVFTFHGLFKLRILSIYSD. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00950 143 Gene3D Transferase(Phosphotransferase) domain 1 1 136 - -
Seca2g00950 143 SUPERFAMILY Protein kinase-like (PK-like) 4 120 IPR011009 -
Seca2g00950 143 Pfam Protein kinase domain 4 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00950 143 ProSiteProfiles Protein kinase domain profile. 1 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00950 143 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00950 Seca-Chr2 15293503 15294244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00950 2 115 AGC Kinase Gene Family AT4G14350 75.439 2.45e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Seca2g00950 Pkinase 4.5e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00950 K08790 - gmx:100795087 191.43