Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00937 ATGTCAATCTTCGATGGAGCTTTCATGGACACACAACTCTCCAAACACACCTCAATCTTCGGTCTCCGTCTCTGGGTTGTCATTGGAATCCTCATCGGCGCTCTCATAGTCTTCACCCTCTTCCTCCTCTCTCTCTGCCTCGTCTCTCGCCGCCGCAACCGCCGCTCCAGCCCCGTCGATTACAAGCTTGCCGGAGACCCTCTTCCGTCCAAGGAAATCCAGGAGATCGTGCACCTTCCGGGACCCCACATGCTCCGGCGACCGGCGCCGGGGAAGGTGCCAGAGATCCACGTGGACATAGGCAAGGCAGAGCACAGGGTGGTGGTGCAGTCTGATAGGGTTTCCAGTGGAGAGAGCAAGGGAACAGGGGTGAGTGGGTGTGAAACGACGTCGTCGTTTGGGAGTGTCAGTGTTGGTGGGATTGGACCTGAGGTGTCGCATCTTGGGTGGGGTAGATGGTACACTTTGAGGGAGCTGGAGGATGCTACTGGTGGGTTGTGTGAGGAAAATGTGATTGGTGAAGGTGGCTATGGGATTGTGTATCATGGGGTGCTCAGTGATGGTACCAAGGTTGCTGTCAAGAACCTGTTGAATAATAAGGGCCAAGCTGAGAAAGAATTTAAAGTAGAGGTAGAAGCAATTGGTAGAGTGCGACACAAAAATCTTGTTAGGTTGCTTGGATACTGTGTTGAGGGGGCCTACAGGATGCTTGTGTATGAATATGTTGACAATGGCAATCTAGAACAGTGGCTACATGGGGATGTTGGAGCTGTAAGCCCTTTGACATGGGATATACGCATGAACATTATTTTGGGAACTGCAAGAGGATTGGCCTATCTTCATGAGGGTCTTGAACCAAAGGTTGTCCACCGAGATGTGAAATCAAGCAACATACTCCTTGATCGCCATTGGAACTCCAAGGTTTCTGATTTTGGGCTTGCTAAACTTTTGTGTTCTGAGAATAGTTATGTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTCTATAGCTTTGGGATACTTATTATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTTAATTTAATAGATTGGTTGAAGACTATGGTTGGAAATAGAAAATCTGAGGAAGTAGTTGATCCTAAGCTCCCTGAGATGCCATCTTCAAAGGCCCTTAAACGTGGCTTGTTGATTGCCCTTCGGTGTGTTGATCCTGATGCAACAAAAAGGCCTAAAATGGGACATGTGATTCACATGCTTGAAGCAAATGACCTGTTATTCAGTAATGAACGCAGAACTGGGGGAGAATCTTCACGTTCCCATCATGATTATCAACAAGAGCATAAGGACTCAAATTTAGATAAGAGGACGGATGGAAGGATCATTGATCAAAGTGAAGATAGTGGTAGAAATGATCATCAATCCACTAGGTGGAGATGA 1491 0.4742 MSIFDGAFMDTQLSKHTSIFGLRLWVVIGILIGALIVFTLFLLSLCLVSRRRNRRSSPVDYKLAGDPLPSKEIQEIVHLPGPHMLRRPAPGKVPEIHVDIGKAEHRVVVQSDRVSSGESKGTGVSGCETTSSFGSVSVGGIGPEVSHLGWGRWYTLRELEDATGGLCEENVIGEGGYGIVYHGVLSDGTKVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLTWDIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILLDRHWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIDWLKTMVGNRKSEEVVDPKLPEMPSSKALKRGLLIALRCVDPDATKRPKMGHVIHMLEANDLLFSNERRTGGESSRSHHDYQQEHKDSNLDKRTDGRIIDQSEDSGRNDHQSTRWR. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00937 496 FunFam Probable serine/threonine-protein kinase At1g01540 146 241 - -
Seca2g00937 496 MobiDBLite consensus disorder prediction 448 496 - -
Seca2g00937 496 Gene3D Transferase(Phosphotransferase) domain 1 242 450 - -
Seca2g00937 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Seca2g00937 496 CDD STKc_IRAK 172 438 - -
Seca2g00937 496 SMART serkin_6 166 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00937 496 SUPERFAMILY Protein kinase-like (PK-like) 145 438 IPR011009 -
Seca2g00937 496 FunFam Putative receptor-like serine/threonine-protein kinase 242 452 - -
Seca2g00937 496 PANTHER OS01G0323000 PROTEIN 8 467 - -
Seca2g00937 496 Gene3D Phosphorylase Kinase; domain 1 149 241 - -
Seca2g00937 496 ProSitePatterns Protein kinases ATP-binding region signature. 172 194 IPR017441 GO:0005524
Seca2g00937 496 ProSiteProfiles Protein kinase domain profile. 166 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca2g00937 496 MobiDBLite consensus disorder prediction 451 496 - -
Seca2g00937 496 Pfam Protein kinase domain 169 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00937 Seca-Chr2 14991282 14995490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00937 135 438 Receptor kinase-like Gene Family AT4G02010 46.753 1.60e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Seca2g00937 Pkinase 7.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00937 - - gmx:100817295 791.956