Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00914 ATGGGAGACCCAATTGAAGGCCAAGACCCACCACCACCATCATTAAAGCTACCACCCCAAAACAACAACAACAATACTCCTCCTCCCTTTCTCTTTACGCCTCCTTTGATGGTGCAAAACCCTTTGGATCCTCAAGATCATAGCTTGGCTGATATTGATTGGGGTGACCTCTTTTGTGGCCAAAATAATAATAATAACTTGCTTCTTGTTGGGGATGCAAAGGAAACAATAATGGATCAATGCGCTTCATCGTCTTCTTTCATGAATGAAAATGGAGCTCATCATCATCGTGAGGAGGAGAAGGGAAACAAGGAGAAAAGAAAAGGTGGGAGAATGAAGAAGACAACAAGAGTGCCAAGGTTTGCTTTTCAAACAAGAAGTGTTGATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGACAGAAAGCTGTGAAGAATAGCACATACCCCAGAAGCTACTACCGGTGCACGCATCACACATGCAACGTGAAGAAACAAGTGCAAAGGCTATCCAAAGACACAAGCATTGTGGTGACGACTTATGAGGGAATTCACAACCACCCATGCGAGAAGCTCATGGAAACGCTAACCCCTCTTCTAAAGCAAATACAGTTTCTTGCTAGCCTGTAA 636 0.434 MGDPIEGQDPPPPSLKLPPQNNNNNTPPPFLFTPPLMVQNPLDPQDHSLADIDWGDLFCGQNNNNNLLLVGDAKETIMDQCASSSSFMNENGAHHHREEEKGNKEKRKGGRMKKTTRVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00914 211 MobiDBLite consensus disorder prediction 1 31 - -
Seca2g00914 211 SMART WRKY_cls 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g00914 211 MobiDBLite consensus disorder prediction 91 106 - -
Seca2g00914 211 FunFam WRKY transcription factor 57 118 192 - -
Seca2g00914 211 Pfam WRKY DNA -binding domain 133 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca2g00914 211 SUPERFAMILY WRKY DNA-binding domain 126 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g00914 211 MobiDBLite consensus disorder prediction 88 114 - -
Seca2g00914 211 Gene3D WRKY domain 117 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca2g00914 211 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 80 193 IPR044810 GO:0003700
Seca2g00914 211 ProSiteProfiles WRKY domain profile. 127 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00914 Seca-Chr2 14136647 14140029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00914 105 211 WRKY Transcription Factor Family AT5G41570 72.897 1.85e-56 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca2g00914 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00914 - - gmx:100796481 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00914 2 14136647 14140029 Seca2g00914 2 14136647 14140029 ECH
Seca2g00914 2 14136647 14140029 Seca2g00914 2 14136647 14140029 PCT