Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00870 ATGACGGGGAAGGCGAAGCCGAAGAAGCACACAGCGAAGGAGATCGCGGCGAAGGTCGACGCGGCGACGACGAACCGTGGCGGCGGAAAAGCTGGTCTTGCGGACCGTACGGGATCGGAGAAAGGAGGACACGCCAAGTACGAGTGCCCACACTGCAAAACGACAGCGCCTGATCTGAAATCGATGCAGATTCACCACGATGCTCGTCACCCAAAGATCCCTTTTGAAGAGGCCAAGCTTGTTAACCTTCACGCTAGTACCGCTGCCGATTCCTCCAAGCCTCGCCCTGGAGTTCGCGGTAGCCACAAGAAGTGA 315 0.581 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLADRTGSEKGGHAKYECPHCKTTAPDLKSMQIHHDARHPKIPFEEAKLVNLHASTAADSSKPRPGVRGSHKK. 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00870 104 MobiDBLite consensus disorder prediction 1 47 - -
Seca2g00870 104 MobiDBLite consensus disorder prediction 84 104 - -
Seca2g00870 104 SUPERFAMILY Expressed protein At2g23090/F21P24.15 29 77 - -
Seca2g00870 104 PANTHER GEO09665P1-RELATED 1 83 IPR045230 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00870 Seca-Chr2 13441719 13442033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca2g00870 1 104 C2H2 Transcription Factor Family AT3G02790 77.143 2.11e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca2g00870 - - pop:7477691 200.29